RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SEC61A2Q9H9S3 476 aa19.97■□□□□ 0.79
PDLIM2-203ENST00000339162 ZFP64Q9NPA5 681 aa19.97■□□□□ 0.79
PDLIM2-203ENST00000339162 AK6Q9Y3D8 172 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-203ENST00000339162 OR4C45A6NMZ5 311 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 CDRT15L2A8MXV6 281 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 ARL6IP5O75915 188 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 CASRP41180 1078 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 EIF1AXP47813 144 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 OXA1LQ15070 435 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 ZNF239Q16600 458 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 HSD17B12Q53GQ0 312 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 WDR38Q5JTN6 314 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 PAMR1Q6UXH9 720 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 TPRA1Q86W33 373 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 GLB1L2Q8IW92 636 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 OR51A4Q8NGJ6 313 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 OR6X1Q8NH79 312 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 ZNF775Q96BV0 537 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 COX4I2Q96KJ9 171 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 ZNF385AQ96PM9 386 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 SLC22A13Q9Y226 551 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 ZFHX4Q86UP3 3567 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 ARGFXA6NJG6 315 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 ZNF726A6NNF4 738 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 GATBO75879 557 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 PAHP00439 452 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 THBS2P35442 1172 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 KIR3DL2P43630 455 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 THEM4Q5T1C6 240 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 UNQ9370/PRO34162Q6UXP9 181 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 ZNF676Q8N7Q3 588 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 OR52N5Q8NH56 324 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 KIAA1143Q96AT1 154 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 FBXL3Q9UKT7 428 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 LRP12Q9Y561 859 aa19.96■□□□□ 0.79
PDLIM2-203ENST00000339162 PPP3R1P63098 170 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 MFGE8Q08431 387 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 BAK1Q16611 211 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 CNIH2Q6PI25 160 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 KCTD18Q6PI47 426 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 FER1L6-AS2Q96M78 137 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 A0A0B4J203 849 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 TRAV1-2A0A0B4J238 106 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 PRKAR1AP10644 381 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 SRMP19623 302 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 SUCLG1P53597 346 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 CSNK2A1P68400 391 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 ROM1Q03395 351 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 CEP78Q5JTW2 689 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 ZNF554Q86TJ5 538 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 DTX3Q8N9I9 347 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 POC5Q8NA72 575 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 OR2M7Q8NG81 312 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 ST7LQ8TDW4 575 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 MCHR2Q969V1 340 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 DCBLD2Q96PD2 775 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 DERL3Q96Q80 235 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 B3GNT4Q9C0J1 378 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 SRRQ9GZT4 340 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 EMC7Q9NPA0 242 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 ASCL3Q9NQ33 180 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 ABI3Q9P2A4 366 aa19.95■□□□□ 0.78
PDLIM2-203ENST00000339162 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 DOK2O60496 412 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 EIF1BO60739 113 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 QDPRP09417 244 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 MZT2AQ6P582 158 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 LRFN4Q6PJG9 635 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 CREB3L2Q70SY1 520 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 GGNQ86UU5 652 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 SULF2Q8IWU5 870 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 RNF128Q8TEB7 428 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 C4orf45Q96LM5 186 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 IP6K3Q96PC2 410 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 CENPMQ9NSP4 180 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 LOC102725191A0A1B0GVB3 256 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 CELA3AP09093 270 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 CFL1P23528 166 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 LAP3P28838 519 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 NBL1P41271 181 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 MRPL28Q13084 256 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 GALNT16Q8N428 558 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 ZNF454Q8N9F8 522 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 OR10H5Q8NGA6 315 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 RYDENQ9NUL5 291 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 KLHL9Q9P2J3 617 aa19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 BOKQ9UMX3 212 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-203ENST00000339162 CFAP47Q6ZTR5 3102 aa19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 PHF3Q92576 2039 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 NPIPA2E9PIF3 369 aa19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 NPIPA3F8WFD2 350 aa19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 TMCC2O75069 709 aa19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 ELK1P19419 428 aa19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 RIDAP52758 137 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 Q499Y3 187 aa19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 FAM173AQ9BQD7 235 aa19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 FAM117AQ9C073 453 aa19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 COMMD4Q9H0A8 199 aa19.93■□□□□ 0.78
PDLIM2-203ENST00000339162 A0A1B0GVC2 190 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 A6NIN4 97 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms