RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PMF1-BGLAPU3KQ54 211 aa13.15□□□□□ -0.3
PRKN-201ENST00000338468 ANK3Q12955 4377 aaKnown RBP13.15□□□□□ -0.3
PRKN-201ENST00000338468 IGHV4-30-2A0A087WSY4 118 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 A0A096LNT2 108 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 RNF223E7ERA6 249 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 AHCYL1O43865 530 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 OR10H3O60404 316 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 TXNDC12O95881 172 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 CTLA4P16410 223 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 ZNF32P17041 273 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 APEX1P27695 318 aaKnown RBP13.14□□□□□ -0.31
PRKN-201ENST00000338468 GLRXP35754 106 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 EFNA4P52798 201 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 NUDT6P53370 316 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 SNRPD2P62316 118 aaKnown RBP13.14□□□□□ -0.31
PRKN-201ENST00000338468 KRTAP1-1Q07627 177 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 ENDOGQ14249 297 aaKnown RBP13.14□□□□□ -0.31
PRKN-201ENST00000338468 RFX4Q33E94 735 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 PABPC1L2AQ5JQF8 200 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 GPR139Q6DWJ6 353 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 ZNF770Q6IQ21 691 aaPredicted RBP13.14□□□□□ -0.31
PRKN-201ENST00000338468 PGM2L1Q6PCE3 622 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 UGT2A3Q6UWM9 527 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 ZNF525Q8N782 197 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 MAPK1IP1LQ8NDC0 245 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 BTBD10Q9BSF8 475 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 REG4Q9BYZ8 158 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 MRPL37Q9BZE1 423 aaKnown RBP13.14□□□□□ -0.31
PRKN-201ENST00000338468 OR52D1Q9H346 318 aa13.14□□□□□ -0.31
PRKN-201ENST00000338468 VSX1Q9NZR4 365 aaPredicted RBP13.14□□□□□ -0.31
PRKN-201ENST00000338468 CR1P17927 2039 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 A0A1W2PPL8 197 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 SOCS2O14508 198 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 XKRYO14609 159 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 KRT36O76013 467 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 PPP1R3DO95685 299 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 SNAP29O95721 258 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 F12P00748 615 aaPredicted RBP13.13□□□□□ -0.31
PRKN-201ENST00000338468 CST2P09228 141 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 BMP4P12644 408 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 APEHP13798 732 aaKnown RBP13.13□□□□□ -0.31
PRKN-201ENST00000338468 CDKN2AP42771 156 aaKnown RBP13.13□□□□□ -0.31
PRKN-201ENST00000338468 PPOXP50336 477 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 PSG4Q00888 419 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 PPP1R8Q12972 351 aaKnown RBP13.13□□□□□ -0.31
PRKN-201ENST00000338468 LRP11Q86VZ4 500 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 ZCCHC24Q8N2G6 241 aaKnown RBP13.13□□□□□ -0.31
PRKN-201ENST00000338468 OR9Q2Q8NGE9 314 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 AKR7LQ8NHP1 331 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 FANK1Q8TC84 345 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 MRPL24Q96A35 216 aaKnown RBP13.13□□□□□ -0.31
PRKN-201ENST00000338468 FOXN4Q96NZ1 517 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 ZNF416Q9BWM5 594 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 TRIM15Q9C019 465 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 NDEL1Q9GZM8 345 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 WNT5BQ9H1J7 359 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 SYT4Q9H2B2 425 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 POLE4Q9NR33 117 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 SLC7A8Q9UHI5 535 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 TMCC3Q9ULS5 477 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 CMAHPQ9Y471 501 aa13.13□□□□□ -0.31
PRKN-201ENST00000338468 LOC100509620A0A075B734 347 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 TNFRSF11BO00300 401 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 MSR1P21757 451 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 DBPQ10586 325 aaPredicted RBP13.12□□□□□ -0.31
PRKN-201ENST00000338468 TRAP1Q12931 704 aaKnown RBP13.12□□□□□ -0.31
PRKN-201ENST00000338468 TSPAN31Q12999 210 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 OTPQ5XKR4 325 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 ZNF620Q6ZNG0 422 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 ADGRG5Q8IZF4 528 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 GNPDA2Q8TDQ7 276 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 POM121L2Q96KW2 1035 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 SAMD8Q96LT4 415 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 OR2H1Q9GZK4 316 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 C1orf198Q9H425 327 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 EMC7Q9NPA0 242 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 CCNB1IP1Q9NPC3 277 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 MYEF2Q9P2K5 600 aaKnown RBP13.12□□□□□ -0.31
PRKN-201ENST00000338468 FZR1Q9UM11 496 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 SPEF1Q9Y4P9 236 aa13.12□□□□□ -0.31
PRKN-201ENST00000338468 IQCMA0A1B0GVH7 501 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 DCTN6O00399 190 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 ARPC3O15145 178 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 GYG2O15488 501 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 SLC16A7O60669 478 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 CRLF1O75462 422 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 MPZL1O95297 269 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 PTHP01270 115 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 GASTP01350 101 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 FAM157BP0CG42 384 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 STOMP27105 288 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 SLC6A6P31641 620 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 IFNGR2P38484 337 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 WNT5AP41221 380 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 EVX1P49640 407 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 RPS6KA3P51812 740 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 ERVS71-1P61550 626 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 GALK2Q01415 458 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 HSF2Q03933 536 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 TBC1D28Q2M2D7 210 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms