RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 ENSAO43768 121 aaKnown RBP4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 SFRP4Q6FHJ7 346 aaPredicted RBP4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 DHRS13Q6UX07 377 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 PNKDQ8N490 385 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 UHRF2Q96PU4 802 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 NMNAT2Q9BZQ4 307 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 HAS3O00219 553 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 CLDN1O95832 211 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 PDGFBP01127 241 aaPredicted RBP4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 MT-ND6P03923 174 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 LAMP2P13473 410 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 SLC6A9P48067 706 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 SLAQ13239 276 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 OCIAD2Q56VL3 154 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 SFRP5Q5T4F7 317 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 MARC1Q5VT66 337 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 OR5D18Q8NGL1 313 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 LIPGQ9Y5X9 500 aa4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 ARHGEF28Q8N1W1 1705 aaKnown RBP4.94□□□□□ -1.62
TNRC6B-202ENST00000335727 EDNRAP25101 427 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 PPOXP50336 477 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 JAG1P78504 1218 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CST9Q5W186 159 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 ZNF66Q6ZN08 573 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 TEX29Q8N6K0 151 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 OR5AU1Q8NGC0 362 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 ARSGQ96EG1 525 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 RCC2Q9P258 522 aaKnown RBP4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 TAPBPO15533 448 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 HOXB5P09067 269 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 HOXA5P20719 270 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 IGFBP4P22692 258 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CBX2Q14781 532 aaPredicted RBP4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 NCR3LG1Q68D85 454 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CMTM2Q8TAZ6 248 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 SDSLQ96GA7 329 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 ATRNO75882 1429 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 DRD2P14416 443 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 GDF5P43026 501 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 SSR2P43308 183 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 MALLQ13021 153 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 COMMD6Q7Z4G1 85 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 C14orf144Q96I85 54 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CD244Q9BZW8 370 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 TRAV30A0A087WSZ9 112 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 A0A0B4J2A0 478 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 HNRNPA1P09651 372 aaKnown RBP eCLIP4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 ITGB7P26010 798 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 OR1E1P30953 314 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CD200P41217 278 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 GCSAMLQ5JQS6 135 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 FAM78BQ5VT40 261 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 FAM69BQ5VUD6 431 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 BIVMQ86UB2 503 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 OR12D3Q9UGF7 316 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 SHPKQ9UHJ6 478 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 TRAPPC1Q9Y5R8 145 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 XRN1Q8IZH2 1706 aaKnown RBP4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 DCTN6O00399 190 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 EBLN1P0CF75 366 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 HOXC9P31274 260 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CTSL3PQ5NE16 218 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CHST13Q8NET6 341 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 FAM213BQ8TBF2 198 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 NRIP2Q9BQI9 281 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 BCAS3Q9H6U6 928 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 VPS29Q9UBQ0 182 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CYSLTR1Q9Y271 337 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CACNA1EQ15878 2313 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 SDHDO14521 159 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 ACKR3P25106 362 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 DUSP3P51452 185 aaPredicted RBP4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 KCTD11Q693B1 232 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 ZNF611Q8N823 705 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CSTL1Q9H114 145 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 HLA-DOBP13765 273 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 ZNF43P17038 809 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 KRTDAPP60985 99 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 PLCXD2Q0VAA5 305 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 SIAH3Q8IW03 269 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CHST4Q8NCG5 386 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 RASGRP4Q8TDF6 673 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 OR1F2PQ96R84 312 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 C7orf77A4D0Y5 90 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 PGPEP1LA6NFU8 196 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 SPINT1O43278 529 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 GJA4P35212 333 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 CSNK1A1P48729 337 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 NRG1Q02297 640 aaPredicted RBP4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 FAM24BQ8N5W8 94 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 SDR42E1Q8WUS8 393 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 EID2BQ96D98 161 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 DERL1Q9BUN8 251 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 PSMB11A5LHX3 300 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 HYAL3O43820 417 aaPredicted RBP4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 SFTPDP35247 375 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 PRICKLE4Q2TBC4 344 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 RNLSQ5VYX0 342 aa4.93□□□□□ -1.62
TNRC6B-202ENST00000335727 TMEM198Q66K66 360 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms