RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 IRF2BPLQ9H1B7 796 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 PCED1AQ9H1Q7 454 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 ZNF69Q9UC07 566 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 NPIPA1Q9UND3 350 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 DHDHQ9UQ10 334 aa16.98■□□□□ 0.31
RFTN1-201ENST00000334133 ANKRD20A5PA0PJZ0 165 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 TMEM200CA6NKL6 621 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 CENPBD1B2RD01 187 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 ALOX12BO75342 701 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 GLSO94925 669 aaPredicted RBP16.97■□□□□ 0.31
RFTN1-201ENST00000334133 RIDAP52758 137 aaKnown RBP16.97■□□□□ 0.31
RFTN1-201ENST00000334133 TMEM71Q6P5X7 295 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 UXS1Q8NBZ7 420 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 RNF128Q8TEB7 428 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 EMC7Q9NPA0 242 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 EIF3KQ9UBQ5 218 aaKnown RBP16.97■□□□□ 0.31
RFTN1-201ENST00000334133 ELF5Q9UKW6 265 aaPredicted RBP16.97■□□□□ 0.31
RFTN1-201ENST00000334133 ZDBF2Q9HCK1 2354 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 OR6C76A6NM76 312 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 EFNA2O43921 213 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 BPHLQ86WA6 291 aaPredicted RBP16.97■□□□□ 0.31
RFTN1-201ENST00000334133 NFAM1Q8NET5 270 aaPredicted RBP16.97■□□□□ 0.31
RFTN1-201ENST00000334133 OR10G3Q8NGC4 313 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 OIT3Q8WWZ8 545 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 HLA-CQ95604 372 aa16.97■□□□□ 0.31
RFTN1-201ENST00000334133 VSX1Q9NZR4 365 aaPredicted RBP16.97■□□□□ 0.31
RFTN1-201ENST00000334133 ACOT7O00154 380 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 SIGLEC6O43699 453 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 CTAG2O75638 210 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 OR2J2O76002 312 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 SULT1A3P0DMM9 295 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 SULT1A4P0DMN0 295 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 EMP2P54851 167 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 OC90Q02509 493 aaPredicted RBP16.96■□□□□ 0.31
RFTN1-201ENST00000334133 ASB5Q8WWX0 329 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 FAM3DQ96BQ1 224 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 CMTM3Q96MX0 182 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 C7orf50Q9BRJ6 194 aaKnown RBP16.96■□□□□ 0.31
RFTN1-201ENST00000334133 ATG5Q9H1Y0 275 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 PLEKHA1Q9HB21 404 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 DLL4Q9NR61 685 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 CA10Q9NS85 328 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 CPAMD8Q8IZJ3 1885 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 ZNF823P16415 610 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 DNASE1P24855 282 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 CAMK2DQ13557 499 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 GLYATL3Q5SZD4 288 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 NUP54Q7Z3B4 507 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 SHDQ96IW2 340 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 SEMA5BQ9P283 1151 aa16.96■□□□□ 0.31
RFTN1-201ENST00000334133 A0A1W2PNR3 127 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 OR2T1O43869 369 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 ECDO95905 644 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-201ENST00000334133 CSRP1P21291 193 aaKnown RBP16.95■□□□□ 0.3
RFTN1-201ENST00000334133 ZNF81P51508 661 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 TMEM225Q6GV28 225 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 KCTD18Q6PI47 426 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-201ENST00000334133 OR1J4Q8NGS1 313 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 OR52N5Q8NH56 324 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 TMEM234Q8WY98 164 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 NKD1Q969G9 470 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 SLC25A44Q96H78 314 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-201ENST00000334133 MRPL39Q9NYK5 338 aaKnown RBP16.95■□□□□ 0.3
RFTN1-201ENST00000334133 AKAP7Q9P0M2 348 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-201ENST00000334133 PHYHO14832 338 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 ALX3O95076 343 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 RAF1P04049 648 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 AP3S2P59780 193 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 C17orf67Q0P5P2 114 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 NLRC3Q7RTR2 1065 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 GPAT4Q86UL3 456 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 MNTQ99583 582 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 WDR77Q9BQA1 342 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-201ENST00000334133 WNT16Q9UBV4 365 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 SRPK3Q9UPE1 567 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 EML6Q6ZMW3 1958 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 COL5A1P20908 1838 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-201ENST00000334133 MEIKINA0A087WXM9 373 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 GGT3PA6NGU5 568 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 PYCARD-AS1I3L0S3 204 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 RLN1P04808 185 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 LCN1P31025 176 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 BIDP55957 195 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 RAB11BQ15907 218 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 PHF19Q5T6S3 580 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 CARD17Q5XLA6 110 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 ZNF627Q7L945 461 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 JAGN1Q8N5M9 183 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 CRB3Q9BUF7 120 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 DPCDQ9BVM2 203 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-201ENST00000334133 OCIAD1Q9NX40 245 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 ETV7Q9Y603 341 aa16.95■□□□□ 0.3
RFTN1-201ENST00000334133 IGHV5-10-1A0A0J9YXX1 117 aa16.94■□□□□ 0.3
RFTN1-201ENST00000334133 P2RY10O00398 339 aa16.94■□□□□ 0.3
RFTN1-201ENST00000334133 XRCC3O43542 346 aa16.94■□□□□ 0.3
RFTN1-201ENST00000334133 RBBP9O75884 186 aa16.94■□□□□ 0.3
RFTN1-201ENST00000334133 ZNF432O94892 652 aa16.94■□□□□ 0.3
RFTN1-201ENST00000334133 CELA2AP08217 269 aa16.94■□□□□ 0.3
RFTN1-201ENST00000334133 KLK2P20151 261 aa16.94■□□□□ 0.3
RFTN1-201ENST00000334133 BLVRAP53004 296 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms