RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NDUFAF7Q7L592 441 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 OR51D1Q8NGF3 324 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 DUSP23Q9BVJ7 150 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 OR10A4Q9H209 315 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 EMC3Q9P0I2 261 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 IGHV5-10-1A0A0J9YXX1 117 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 VSTM2BA6NLU5 285 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 TTLL8A6PVC2 850 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 NPIPA5E9PKD4 350 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 SSNA1O43805 119 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 SRSF10O75494 262 aaKnown RBP13.06□□□□□ -0.32
TPM3-206ENST00000330188 ITGA5P08648 1049 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 FOSL2P15408 326 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 VEGFCP49767 419 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 ZP1P60852 638 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 ANGPT1Q15389 498 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 CACNA1EQ15878 2313 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 FAAP20Q6NZ36 180 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 ANKRD16Q6P6B7 361 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 SLC26A10Q8NG04 563 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 OR11H4Q8NGC9 324 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 ZNF431Q8TF32 576 aaPredicted RBP13.06□□□□□ -0.32
TPM3-206ENST00000330188 ASB5Q8WWX0 329 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 KCNK17Q96T54 332 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 RARRES3Q9UL19 164 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 MGAT4AQ9UM21 535 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 NPIPA1Q9UND3 350 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 DHDHQ9UQ10 334 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 NPIPB13A6NJU9 1138 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 SHISA8B8ZZ34 492 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 NPIPB4C9JG80 1138 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 SLC17A2O00624 439 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 ARPC1BO15143 372 aaKnown RBP13.05□□□□□ -0.32
TPM3-206ENST00000330188 ZNF208O43345 1280 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 PRAF2O60831 178 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 CTAG2O75638 210 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 TGM6O95932 706 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 FBXO45P0C2W1 286 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 HTR2BP41595 481 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 POU3F4P49335 361 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 DAP3P51398 398 aaKnown RBP13.05□□□□□ -0.32
TPM3-206ENST00000330188 MAP2K6P52564 334 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 LINC00303Q3SY05 128 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 LYSMD4Q5XG99 296 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 FAM166AQ6J272 317 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 TSSK4Q6SA08 328 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 SEZ6L2Q6UXD5 910 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 CPEB2Q7Z5Q1 589 aaKnown RBP13.05□□□□□ -0.32
TPM3-206ENST00000330188 LUZP2Q86TE4 346 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 BIVMQ86UB2 503 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 PIGKQ92643 395 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 SNAPC3Q92966 411 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 DDIT4LQ96D03 193 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 KCNK15Q9H427 330 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 CHST11Q9NPF2 352 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 PTTG3PQ9NZH4 202 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 FBXL3Q9UKT7 428 aa13.05□□□□□ -0.32
TPM3-206ENST00000330188 IGKV1D-43A0A0B4J1Z2 117 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 A0A1B0GUH1 482 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 A0A1B0GVI7 797 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 GGT3PA6NGU5 568 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 ETV2O00321 342 aaPredicted RBP13.04□□□□□ -0.32
TPM3-206ENST00000330188 SIGLEC6O43699 453 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 ALX3O95076 343 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 ALDOBP05062 364 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 NAGAP17050 411 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 DHPSP49366 369 aaPredicted RBP13.04□□□□□ -0.32
TPM3-206ENST00000330188 TLE3Q04726 772 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 RAB11BQ15907 218 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 TMEM225Q6GV28 225 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 DNM1P34Q6PK57 102 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 Q6ZTK2 550 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 TTC9Q92623 222 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 CCDC74BQ96LY2 380 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 GPR137Q96N19 417 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 SPSB2Q99619 263 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 FSCN3Q9NQT6 498 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 DLL4Q9NR61 685 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 MED29Q9NX70 200 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 SIT1Q9Y3P8 196 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 NPTNQ9Y639 398 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 R4GMQ9 66 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 ASCC3Q8N3C0 2202 aaKnown RBP13.04□□□□□ -0.32
TPM3-206ENST00000330188 TNRC6BQ9UPQ9 1833 aaKnown RBP13.04□□□□□ -0.32
TPM3-206ENST00000330188 H7C417 338 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 ERVH48-1M5A8F1 160 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 ONECUT2O95948 504 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 ZNF823P16415 610 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 PTGDSP41222 190 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 HSF1Q00613 529 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 POU3F1Q03052 451 aaPredicted RBP13.04□□□□□ -0.32
TPM3-206ENST00000330188 PCK2Q16822 640 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 C2orf76Q3KRA6 126 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 METTL11BQ5VVY1 283 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 LCN10Q6JVE6 187 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 LYPD8Q6UX82 237 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 ZNF782Q6ZMW2 699 aaPredicted RBP13.04□□□□□ -0.32
TPM3-206ENST00000330188 ZNF767PQ75MW2 155 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 DCXRQ7Z4W1 244 aa13.04□□□□□ -0.32
TPM3-206ENST00000330188 PLPP7Q8NBV4 271 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms