RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 PRSS57Q6UWY2 283 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 TGIF2LYQ8IUE0 185 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 SLC30A7Q8NEW0 376 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 OR1J2Q8NGS2 313 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 GIPC3Q8TF64 312 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 ZNF75AQ96N20 296 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 WACQ9BTA9 647 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 CACNG6Q9BXT2 260 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 EGLN3Q9H6Z9 239 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 BARX1Q9HBU1 254 aaPredicted RBP12.85□□□□□ -0.35
CLRN1-203ENST00000328863 POLE4Q9NR33 117 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 FBXO9Q9UK97 447 aaPredicted RBP12.85□□□□□ -0.35
CLRN1-203ENST00000328863 BAIAP2Q9UQB8 552 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 POLR1DQ9Y2S0 133 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 VPS13CQ709C8 3753 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 CELSR1Q9NYQ6 3014 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 USF3Q68DE3 2245 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 OVOL3O00110 214 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 EBAG9O00559 213 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 SLC16A7O60669 478 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 MMP7P09237 267 aaPredicted RBP12.84□□□□□ -0.35
CLRN1-203ENST00000328863 ZNF32P17041 273 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 LAP3P28838 519 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 APLNRP35414 380 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 ERFP50548 548 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 ADAM8P78325 824 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 SCRN3Q0VDG4 424 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 C11orf71Q6IPW1 123 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 KRT80Q6KB66 452 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 PTCHD4Q6ZW05 846 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 YTHDF3Q7Z739 585 aaKnown RBP12.84□□□□□ -0.35
CLRN1-203ENST00000328863 ZNF584Q8IVC4 421 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 PAPD5Q8NDF8 572 aaKnown RBP12.84□□□□□ -0.35
CLRN1-203ENST00000328863 SDR9C7Q8NEX9 313 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 OR2T33Q8NG76 320 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 FGFBP3Q8TAT2 258 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 TEX47Q8TBZ9 253 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 RACGAP1Q9H0H5 632 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 RERGLQ9H628 205 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 ZNF556Q9HAH1 456 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 IL20Q9NYY1 176 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 KIF17Q9P2E2 1029 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 DNAJB9Q9UBS3 223 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 F8P00451 2351 aa12.84□□□□□ -0.35
CLRN1-203ENST00000328863 B9A039 149 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 SOX14O95416 240 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 SNAP29O95721 258 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 GASTP01350 101 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 FCGR1AP12314 374 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 HIST1H1CP16403 213 aaKnown RBP12.83□□□□□ -0.36
CLRN1-203ENST00000328863 SERPINF1P36955 418 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 AQP6Q13520 282 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 EFNB3Q15768 340 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 PABPC1L2AQ5JQF8 200 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 SYT9Q86SS6 491 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 KRTAP1-3Q8IUG1 177 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 GLB1L2Q8IW92 636 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 ALDH16A1Q8IZ83 802 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 WFDC11Q8NEX6 87 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 OR4K13Q8NH42 304 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 FBXO17Q96EF6 278 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 NMNAT3Q96T66 252 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 PLA2G12AQ9BZM1 189 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 NUAK2Q9H093 628 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 PDP1Q9P0J1 537 aaPredicted RBP12.83□□□□□ -0.36
CLRN1-203ENST00000328863 FKBP7Q9Y680 259 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 PMF1-BGLAPU3KQ54 211 aa12.83□□□□□ -0.36
CLRN1-203ENST00000328863 ZNF469Q96JG9 3925 aaPredicted RBP12.83□□□□□ -0.36
CLRN1-203ENST00000328863 H3BN98 237 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 H7C417 338 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 BHLHE40O14503 412 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 IFNGP01579 166 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 CD8AP01732 235 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 OR4A8P0C604 315 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 ZNF35P13682 527 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 NR4A1P22736 598 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 CDKN2AP42771 156 aaKnown RBP12.82□□□□□ -0.36
CLRN1-203ENST00000328863 HGFACQ04756 655 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 GLO1Q04760 184 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLRN1-203ENST00000328863 COX10Q12887 443 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 ADIPOQQ15848 244 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 UNQ6126/PRO20091Q6UXV3 157 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 OR52E2Q8NGJ4 325 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 OR8D4Q8NGM9 314 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 DNAJC9Q8WXX5 260 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 ZNF416Q9BWM5 594 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 TSSK6Q9BXA6 273 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 OR2H1Q9GZK4 316 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 PLK3Q9H4B4 646 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 EMC7Q9NPA0 242 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 RPRD1BQ9NQG5 326 aaKnown RBP12.82□□□□□ -0.36
CLRN1-203ENST00000328863 ARMC1Q9NVT9 282 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 NDRG4Q9ULP0 352 aaKnown RBP12.82□□□□□ -0.36
CLRN1-203ENST00000328863 CMAHPQ9Y471 501 aa12.82□□□□□ -0.36
CLRN1-203ENST00000328863 ARFGEF3Q5TH69 2177 aa12.81□□□□□ -0.36
CLRN1-203ENST00000328863 DOK2O60496 412 aa12.81□□□□□ -0.36
CLRN1-203ENST00000328863 TIPRLO75663 272 aa12.81□□□□□ -0.36
CLRN1-203ENST00000328863 ERCC1P07992 297 aaPredicted RBP12.81□□□□□ -0.36
CLRN1-203ENST00000328863 ZNF3P17036 446 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms