RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PI3P19957 117 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SDHBP21912 280 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SOX18P35713 384 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 DDOSTP39656 456 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 C19orf57Q0VDD7 668 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 OR2B11Q5JQS5 317 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 OR13D1Q8NGV5 346 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 OR11L1Q8NGX0 322 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 FBXW5Q969U6 566 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 HAPLN2Q9GZV7 340 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 GDF2Q9UK05 429 aaPredicted RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 SCML1Q9UN30 329 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 OTUD1Q5VV17 481 aaPredicted RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 UPRTQ96BW1 309 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SLC12A9Q9BXP2 914 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 PIGLQ9Y2B2 252 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 B3GALT5Q9Y2C3 310 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 NXPH2O95156 264 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 FAM26DQ5JW98 314 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 GLYATL3Q5SZD4 288 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 KDM4DQ6B0I6 523 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 Q6ZRG5 221 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 FIBINQ8TAL6 211 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SLC39A13Q96H72 371 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 TWSG1Q9GZX9 223 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 HCSTQ9UBK5 93 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 Q9Y3F1 56 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 RNF212BA8MTL3 300 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 HS3ST1O14792 307 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 MRPS10P82664 201 aaKnown RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 RAB40BQ12829 278 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.29□□□□□ -1.24
CIITA-201ENST00000324288 TMEM244Q5VVB8 128 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 MMP21Q8N119 569 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 TMEM40Q8WWA1 233 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 MSL2Q9HCI7 577 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 LAMP3Q9UQV4 416 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 A8MVM7 634 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 OR10A3P58181 314 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 TOMM20LQ6UXN7 152 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 LIN7BQ9HAP6 207 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SLC35A3Q9Y2D2 325 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SELENOFO60613 162 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 LALBAP00709 142 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 PMCHP20382 165 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 MOGAT2Q3SYC2 334 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 RPL22L1Q6P5R6 122 aaKnown RBP7.28□□□□□ -1.24
CIITA-201ENST00000324288 OR13C5Q8NGS8 318 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 MOB1AQ9H8S9 216 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 PIK3C2AO00443 1686 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 NID2Q14112 1375 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 OR5H14A6NHG9 310 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 PMS2P2O95744 297 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 NAGAP17050 411 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 ACHEP22303 614 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 IVDP26440 423 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 GCAP28676 217 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 GORASP2Q9H8Y8 452 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 PRELID3BQ9Y3B1 194 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 KPTNQ9Y664 436 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 ZNF623O75123 536 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 NDUFB7P17568 137 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 HLA-FP30511 346 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 CBLL1Q75N03 491 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 GDPD3Q7L5L3 318 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 ADIPOR2Q86V24 386 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 LMO3Q8TAP4 145 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 CMBLQ96DG6 245 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 OR51I2Q9H344 312 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 TAAR2Q9P1P5 351 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 BOKQ9UMX3 212 aaPredicted RBP7.28□□□□□ -1.24
CIITA-201ENST00000324288 SNX11Q9Y5W9 270 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 UBR2Q8IWV8 1755 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 H0YGG7 62 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 SPINK4O60575 86 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 ZNF217O75362 1048 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 RAB7AP51149 207 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 PARS2Q7L3T8 475 aaKnown RBP7.28□□□□□ -1.24
CIITA-201ENST00000324288 CATSPERDQ86XM0 798 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 EGLN2Q96KS0 407 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 LTB4R2Q9NPC1 389 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 NTNG1Q9Y2I2 539 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 ECM29Q5VYK3 1845 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 GABARAPH6UMI1 98 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 GABARAPO95166 117 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 SCG5P05408 212 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 HTR3AP46098 478 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 EPHA5P54756 1037 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 RING1Q06587 406 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 C8orf33Q9H7E9 229 aaPredicted RBP7.28□□□□□ -1.24
CIITA-201ENST00000324288 CSNK1EP49674 416 aaKnown RBP7.28□□□□□ -1.24
CIITA-201ENST00000324288 SHISA4Q96DD7 197 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 ANKRD19PQ9H560 264 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 GAR1Q9NY12 217 aaKnown RBP7.28□□□□□ -1.24
CIITA-201ENST00000324288 RNF150Q9ULK6 438 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 COL1A1P02452 1464 aaPredicted RBP7.28□□□□□ -1.24
CIITA-201ENST00000324288 BTBD17A6NE02 478 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 UGDHO60701 494 aa7.28□□□□□ -1.24
CIITA-201ENST00000324288 ALOX5APP20292 161 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms