RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 COMMD7Q86VX2 200 aa15.67■□□□□ 0.1
COL9A1-201ENST00000320755 OR51A2Q8NGJ7 313 aa15.67■□□□□ 0.1
COL9A1-201ENST00000320755 CENPMQ9NSP4 180 aa15.67■□□□□ 0.1
COL9A1-201ENST00000320755 TAS2R4Q9NYW5 299 aa15.67■□□□□ 0.1
COL9A1-201ENST00000320755 NPTNQ9Y639 398 aa15.67■□□□□ 0.1
COL9A1-201ENST00000320755 IGHV1OR21-1A0A087WYE8 117 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 L7N2F9 121 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 PRSS3P35030 304 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 POLR2HP52434 150 aaKnown RBP15.66■□□□□ 0.1
COL9A1-201ENST00000320755 OPCMLQ14982 345 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 JAGN1Q8N5M9 183 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 SUN5Q8TC36 379 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 ARL5BQ96KC2 179 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 CHST6Q9GZX3 395 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 DUSP15Q9H1R2 295 aaPredicted RBP15.66■□□□□ 0.1
COL9A1-201ENST00000320755 SLC22A23A1A5C7 686 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 CXCL2P19875 107 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 FAUP35544 74 aaKnown RBP15.66■□□□□ 0.1
COL9A1-201ENST00000320755 RIDAP52758 137 aaKnown RBP15.66■□□□□ 0.1
COL9A1-201ENST00000320755 ASPHD2Q6ICH7 369 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 OR1N1Q8NGS0 311 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 OR1J4Q8NGS1 313 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 SFXN2Q96NB2 322 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 FOXQ1Q9C009 403 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 TXNIPQ9H3M7 391 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 LRP12Q9Y561 859 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 FER1L5A0AVI2 2057 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 A8MVM7 634 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 ARPC5O15511 151 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 CSN2P05814 226 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 MNDAP41218 407 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 ARRB1P49407 418 aaPredicted RBP15.66■□□□□ 0.1
COL9A1-201ENST00000320755 ZNF626Q68DY1 528 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 C11orf88Q6PI97 169 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 SLC25A44Q96H78 314 aaPredicted RBP15.66■□□□□ 0.1
COL9A1-201ENST00000320755 CMKLR1Q99788 373 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 C1QTNF6Q9BXI9 259 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 FGF21Q9NSA1 209 aa15.66■□□□□ 0.1
COL9A1-201ENST00000320755 H3BMH7 237 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 PLPP3O14495 311 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 PHYHO14832 338 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 EIF4E2O60573 245 aaKnown RBP15.65■□□□□ 0.1
COL9A1-201ENST00000320755 LMX1BO60663 402 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 LDOC1O95751 146 aaPredicted RBP15.65■□□□□ 0.1
COL9A1-201ENST00000320755 FBXW4P57775 412 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 DCAF7P61962 342 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 OR7A5Q15622 319 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 C4orf46Q504U0 113 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 SFRP5Q5T4F7 317 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 TMEM225Q6GV28 225 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 KCTD18Q6PI47 426 aaPredicted RBP15.65■□□□□ 0.1
COL9A1-201ENST00000320755 ZNF248Q8NDW4 579 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 RNF128Q8TEB7 428 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 TNFAIP8L1Q8WVP5 186 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 UCK1Q9HA47 277 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 MED29Q9NX70 200 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 MAB21L2Q9Y586 359 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 FXYD6-FXYD2A0A087WZ82 144 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 IGLV1-36A0A0B4J1U3 117 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 TMEM272A0A1B0GTI8 110 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 UBE2QL1A1L167 161 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 H3BML4 177 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 PDGFAP04085 211 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 RBMS2Q15434 407 aaKnown RBP15.65■□□□□ 0.1
COL9A1-201ENST00000320755 CSRP2Q16527 193 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 ZNF519Q8TB69 540 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 C15orf40Q8WUR7 153 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 ASB5Q8WWX0 329 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 MSANTD3Q96H12 275 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 MNTQ99583 582 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 FXYD6Q9H0Q3 95 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 EXO5Q9H790 373 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 ZNF275Q9NSD4 429 aaPredicted RBP15.65■□□□□ 0.1
COL9A1-201ENST00000320755 ZNF224Q9NZL3 707 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 EMC3Q9P0I2 261 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 CKLFQ9UBR5 152 aa15.65■□□□□ 0.1
COL9A1-201ENST00000320755 LINC00862A6NCI5 91 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 POM121CA8CG34 1229 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 TEX46H3BTG2 121 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 M0QYG6 137 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 CD2P06729 351 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 CSRP1P21291 193 aaKnown RBP15.64■□□□□ 0.09
COL9A1-201ENST00000320755 CSF2RBP32927 897 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 NUDT1P36639 197 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 ARPC4P59998 168 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 GLO1Q04760 184 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 TMED4Q7Z7H5 227 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 EMC6Q9BV81 110 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 MED11Q9P086 117 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 SUSD2Q9UGT4 822 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 LOC100289279A0A1B0GTE1 492 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 GOSR2O14653 212 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 ZNF354AO60765 605 aaPredicted RBP15.64■□□□□ 0.09
COL9A1-201ENST00000320755 MT-ATP6P00846 226 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 GLULP15104 373 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 ZNF823P16415 610 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 POU3F2P20265 443 aaPredicted RBP15.64■□□□□ 0.09
COL9A1-201ENST00000320755 NFYAP23511 347 aaPredicted RBP15.64■□□□□ 0.09
COL9A1-201ENST00000320755 DNASE1L1P49184 302 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 DCXRQ7Z4W1 244 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms