RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ACTL6AO96019 429 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 JMJD7P0C870 316 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 UBBP0CG47 229 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 UBCP0CG48 685 aaKnown RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 ARRB1P49407 418 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 PRMT2P55345 433 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 ELAVL1Q15717 326 aaKnown RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 CST6Q15828 149 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 TMPRSS11FQ6ZWK6 438 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 MENTQ9BUN1 341 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 POTEKPQ9BYX7 375 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 INPP5EQ9NRR6 644 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 MTFP1Q9UDX5 166 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 GPN3Q9UHW5 284 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 DHDHQ9UQ10 334 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 EMC9Q9Y3B6 208 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 FRYQ5TBA9 3013 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 TRAV14DV4A0A0A6YYC5 116 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 ERCC1P07992 297 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 RAB13P51153 203 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 FAM209BQ5JX69 171 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 HACD4Q5VWC8 232 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 SVBPQ8N300 66 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 SPICQ8N5J4 248 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 CD300LFQ8TDQ1 290 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 CCDC107Q8WV48 283 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 ZC3H10Q96K80 434 aaKnown RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 GLS2Q9UI32 602 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 OIP5O43482 229 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 RAB40ALP0C0E4 278 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 ZNF14P17017 642 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 HSD17B2P37059 387 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 GPR143P51810 404 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 FLI1Q01543 452 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 ZNF616Q08AN1 781 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 ZNF77Q15935 545 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 WDR38Q5JTN6 314 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 NKAIN2Q5VXU1 208 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 ADAD2Q8NCV1 583 aaKnown RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 STOML3Q8TAV4 291 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 METTL21AQ8WXB1 218 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 RAB40AQ8WXH6 277 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 MRPL48Q96GC5 212 aaKnown RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 TMEM41AQ96HV5 264 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 IFT22Q9H7X7 185 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 PRMT8Q9NR22 394 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-201ENST00000318607 ANAPC1Q9H1A4 1944 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 A0A0B4J2E0 115 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 A0A1B0GX12 115 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 PRSS44E7EML9 344 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 PTP4A3O75365 173 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 CSF1P09603 554 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 MYOGP15173 224 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 GNB3P16520 340 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 CD53P19397 219 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 BPIFB3P59826 476 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 POU4F2Q12837 409 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 KTI12Q96EK9 354 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-201ENST00000318607 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 ZNF629Q9UEG4 869 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-201ENST00000318607 DIDO1Q9BTC0 2240 aaKnown RBP12.86□□□□□ -0.35
PABPC1-201ENST00000318607 PHF3Q92576 2039 aaKnown RBP12.86□□□□□ -0.35
PABPC1-201ENST00000318607 ASCL1P50553 236 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 ULK3Q6PHR2 472 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 RAB11FIP2Q7L804 512 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 ANKRD33Q7Z3H0 272 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 BIVMQ86UB2 503 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 CCDC36Q8IYA8 594 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 DEFB119Q8N690 84 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 OR13C9Q8NGT0 318 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 OR2L8Q8NGY9 312 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 MARCH1Q8TCQ1 289 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 CCDC74AQ96AQ1 378 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 CHMP1AQ9HD42 196 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-201ENST00000318607 NPTNQ9Y639 398 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 COLEC10Q9Y6Z7 277 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 METTL21EPA6NDL7 271 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 MPTX1A8MV57 137 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 CEACAM5P06731 702 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 SERPINF1P36955 418 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 PRSS12P56730 875 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 PPIAP62937 165 aaKnown RBP12.86□□□□□ -0.35
PABPC1-201ENST00000318607 PLAURQ03405 335 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 ATPAF1Q5TC12 328 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-201ENST00000318607 HSD17B13Q7Z5P4 300 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-201ENST00000318607 RNF113BQ8IZP6 322 aaKnown RBP12.86□□□□□ -0.35
PABPC1-201ENST00000318607 SLC41A2Q96JW4 573 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 RBM14Q96PK6 669 aaKnown RBP12.86□□□□□ -0.35
PABPC1-201ENST00000318607 NUDT22Q9BRQ3 303 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 BANF2Q9H503 90 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.86□□□□□ -0.352e-14■■■■□ 19.8
PABPC1-201ENST00000318607 POLR1DQ9Y2S0 133 aa12.86□□□□□ -0.35
PABPC1-201ENST00000318607 TMEM218A2RU14 115 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 OR2A4O95047 310 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 GPR75O95800 540 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 HRH1P35367 487 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 DRD3P35462 400 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 RAG2P55895 527 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 TRA2BP62995 288 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms