RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 SPRNQ5BIV9 151 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 USP43Q70EL4 1123 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 HDDC2Q7Z4H3 204 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 PEG10Q86TG7 708 aaKnown RBP14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 CLDN22Q8N7P3 220 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 SLC25A40Q8TBP6 338 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 IPCEF1Q8WWN9 437 aaPredicted RBP14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 LRRC58Q96CX6 371 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 ZNF583Q96ND8 569 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 KCNN2Q9H2S1 579 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 TXNIPQ9H3M7 391 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 SAP30LQ9HAJ7 183 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 SMURF2Q9HAU4 748 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 BAG5Q9UL15 447 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 TRRAPQ9Y4A5 3859 aa14.82□□□□□ -0.04
EXOSC4-201ENST00000316052 MEGF8Q7Z7M0 2845 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 CLDN25C9JDP6 229 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 MT-ND5P03915 603 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 COMPP49747 757 aaPredicted RBP14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 CD47Q08722 323 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 FAM27BQ5VT28 67 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 METTL21CQ5VZV1 264 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 ZNF771Q7L3S4 317 aaPredicted RBP14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 KLF14Q8TD94 323 aaPredicted RBP14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 FAM216AQ8WUB2 273 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 CCL17Q92583 94 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 RAB39BQ96DA2 213 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 ECSITQ9BQ95 431 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 OR2J1Q9GZK6 312 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 POLR2J2Q9GZM3 115 aaKnown RBP14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 POLR2J3Q9H1A7 115 aaKnown RBP14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 WNT5BQ9H1J7 359 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 EIF3KQ9UBQ5 218 aaKnown RBP14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 MED31Q9Y3C7 131 aa14.81□□□□□ -0.04
EXOSC4-201ENST00000316052 TANC2Q9HCD6 1990 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 A0A0G2JMP0 313 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 A0A0X1KG70 313 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 TMEM89A2RUT3 159 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 ZSCAN5BA6NJL1 495 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 NPIPB13A6NJU9 1138 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 NPIPB4C9JG80 1138 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 UBOX5O94941 541 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 NGFP01138 241 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 LAP3P28838 519 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 GCH1P30793 250 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 RBMXP38159 391 aaKnown RBP14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 GDI2P50395 445 aaKnown RBP14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 ARFIP2P53365 341 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 ACTG1P63261 375 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 TOP3AQ13472 1001 aaPredicted RBP14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 FAM209AQ5JX71 171 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 MBNL2Q5VZF2 373 aaKnown RBP14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 RFPL4BQ6ZWI9 263 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 C1QL2Q7Z5L3 287 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 OR4M2Q8NGB6 313 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 OR8J3Q8NGG0 315 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 C10orf82Q8WW14 230 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 RAB1CQ92928 201 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 ELMOD3Q96FG2 381 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 SH3GL1Q99961 368 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 OR2H1Q9GZK4 316 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 STX18Q9P2W9 335 aaKnown RBP14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 OPN4Q9UHM6 478 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 KLHL21Q9UJP4 597 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 HIF3AQ9Y2N7 669 aa14.8□□□□□ -0.04
EXOSC4-201ENST00000316052 HMGB1P1B2RPK0 211 aaPredicted RBP14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 VIMP08670 466 aaKnown RBP14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 THRBP10828 461 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 RPL27P61353 136 aaKnown RBP14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 FHL1Q13642 323 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 CYBRD1Q53TN4 286 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 ALG10Q5BKT4 473 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 DCAF12L2Q5VW00 463 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 IGFN1Q86VF2 1251 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 LRRC75AQ8NAA5 344 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 ABHD4Q8TB40 342 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 GCDHQ92947 438 aaPredicted RBP14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 TIMD4Q96H15 378 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 SLC6A7Q99884 636 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 ALG12Q9BV10 488 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 A4GNTQ9UNA3 340 aa14.79□□□□□ -0.04
EXOSC4-201ENST00000316052 PLSCR5A0PG75 271 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 TRIM77I1YAP6 450 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 J3QLI3 93 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 SCG5P05408 212 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 ADH4P08319 380 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 CST2P09228 141 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 PPP1CBP62140 327 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 TAF11Q15544 211 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 ZNF774Q6NX45 483 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 FOXL2NBQ6ZUU3 175 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 TEX29Q8N6K0 151 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 GEMIN6Q8WXD5 167 aaKnown RBP14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 BPIFA2Q96DR5 249 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 RBP7Q96R05 134 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 GAL3ST1Q99999 423 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 SIKE1Q9BRV8 207 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 TMEM120AQ9BXJ8 343 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 MSL2Q9HCI7 577 aa14.78□□□□□ -0.04
EXOSC4-201ENST00000316052 ESM1Q9NQ30 184 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms