RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ZMAT3Q9HA38 289 aaKnown RBP12.29□□□□□ -0.44
RFFL-201ENST00000315249 A0A1W2PR80 420 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 I6L893 689 aaPredicted RBP12.29□□□□□ -0.44
RFFL-201ENST00000315249 CRYBA1P05813 215 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 CLDN6P56747 220 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 ZFAND1Q8TCF1 268 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 PRRT1Q99946 306 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 SLCO4A1Q96BD0 722 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 LIN7BQ9HAP6 207 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 FPR3P25089 353 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 HTR1FP30939 366 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 CAMLGP49069 296 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 ZNF136P52737 540 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 ILKQ13418 452 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 B3GNTL1Q67FW5 361 aaPredicted RBP12.29□□□□□ -0.44
RFFL-201ENST00000315249 RGS7BPQ6MZT1 257 aaPredicted RBP12.29□□□□□ -0.44
RFFL-201ENST00000315249 DPY19L2P1Q6NXN4 242 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 COL4A1P02462 1669 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 ZC3H12DA2A288 527 aaKnown RBP12.29□□□□□ -0.44
RFFL-201ENST00000315249 HSD17B6O14756 317 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 MMP11P24347 488 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 TAS2R46P59540 309 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 RPL18Q07020 188 aaKnown RBP12.29□□□□□ -0.44
RFFL-201ENST00000315249 MSMO1Q15800 293 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 UBE2NLQ5JXB2 153 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 OR4M1Q8NGD0 313 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 GPR78Q96P69 363 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 TAS2R3Q9NYW6 316 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 TNFRSF10AO00220 468 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 HIST1H1CP16403 213 aaKnown RBP12.29□□□□□ -0.44
RFFL-201ENST00000315249 TAS2R20P59543 309 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 RRAS2P62070 204 aaPredicted RBP12.29□□□□□ -0.44
RFFL-201ENST00000315249 FUNDC1Q8IVP5 155 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 TTC9Q92623 222 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 ZNF649Q9BS31 505 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 RPH3ALQ9UNE2 315 aa12.29□□□□□ -0.44
RFFL-201ENST00000315249 ABCD4O14678 606 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 HOXC8P31273 242 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 MEF2DQ14814 521 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 NLRC3Q7RTR2 1065 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 SYT9Q86SS6 491 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 C1orf87Q8N0U7 546 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 SLC22A24Q8N4F4 322 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 ALG14Q96F25 216 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 SULT4A1Q9BR01 284 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 ZNF696Q9H7X3 374 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 MLLT11Q13015 90 aaPredicted RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 GLYATL3Q5SZD4 288 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 CISD2Q8N5K1 135 aaKnown RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 HIF1ANQ9NWT6 349 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 TAS2R16Q9NYV7 291 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 A0A0G2JMP0 313 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 M0R135 149 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 AGFG2O95081 481 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 GPX2P18283 190 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 HNF4GQ14541 408 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 LRRC56Q8IYG6 542 aaPredicted RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 OR4M2Q8NGB6 313 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 ZNF799Q96GE5 643 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 THAP7Q9BT49 309 aaPredicted RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 MDC1Q14676 2089 aaKnown RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 CA5AP35218 305 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 YBX1P67809 324 aaKnown RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 LYPD8Q6UX82 237 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 CAMKMTQ7Z624 323 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 REEP6Q96HR9 211 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 HDGFL3Q9Y3E1 203 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 PDGFBP01127 241 aaPredicted RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 SRP14P37108 136 aaKnown RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 TMEM211Q6ICI0 200 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 SLC16A9Q7RTY1 509 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 SPARTQ8N0X7 666 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 HMX2A2RU54 273 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 NXPH3O95157 252 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 MT-ND4P03905 459 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 AGTR1P30556 359 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 KIR2DL1P43626 348 aaPredicted RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 ANGPTL5Q86XS5 388 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 EGFL6Q8IUX8 553 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 OR52I1Q8NGK6 324 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 SLAMF6Q96DU3 332 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 CNRIP1Q96F85 164 aaPredicted RBP12.28□□□□□ -0.44
RFFL-201ENST00000315249 BANF2Q9H503 90 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 TMEM100Q9NV29 134 aa12.28□□□□□ -0.44
RFFL-201ENST00000315249 RGS11O94810 467 aa12.27□□□□□ -0.44
RFFL-201ENST00000315249 SDHAP31040 664 aa12.27□□□□□ -0.44
RFFL-201ENST00000315249 SLC9A3R2Q15599 337 aa12.27□□□□□ -0.44
RFFL-201ENST00000315249 UBL7Q96S82 380 aaPredicted RBP12.27□□□□□ -0.44
RFFL-201ENST00000315249 SUCNR1Q9BXA5 334 aa12.27□□□□□ -0.44
RFFL-201ENST00000315249 PRELID3BQ9Y3B1 194 aa12.27□□□□□ -0.44
RFFL-201ENST00000315249 FAM186AA6NE01 2351 aa12.27□□□□□ -0.44
RFFL-201ENST00000315249 SPTA1P02549 2419 aa12.27□□□□□ -0.44
RFFL-201ENST00000315249 IGHV5-10-1A0A0J9YXX1 117 aa12.27□□□□□ -0.44
RFFL-201ENST00000315249 ALPLP05186 524 aa12.27□□□□□ -0.44
RFFL-201ENST00000315249 SNRPBP14678 240 aaKnown RBP12.27□□□□□ -0.44
RFFL-201ENST00000315249 TAS2R31P59538 309 aa12.27□□□□□ -0.44
RFFL-201ENST00000315249 BPIFB2Q8N4F0 458 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms