RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NPIPB4C9JG80 1138 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 B4GALT2O60909 372 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 DUS4LO95620 317 aaKnown RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 LSSP48449 732 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 CSNK1EP49674 416 aaKnown RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 HTRA4P83105 476 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 RNASE12Q5GAN4 147 aaKnown RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 FBXW12Q6X9E4 464 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 DPY19L4Q7Z388 723 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 C7orf34Q96L11 122 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 UBE2ZQ9H832 354 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 UCK1Q9HA47 277 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 LINC00862A6NCI5 91 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 CDC123O75794 336 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 GLSO94925 669 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 GJB5O95377 273 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF8P17098 575 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 SERPINF1P36955 418 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 CAV2P51636 162 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 CLDN6P56747 220 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 UBE2KP61086 200 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 FOXK1P85037 733 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 LYG2Q86SG7 212 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 FAM217AQ8IXS0 508 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 SCAMP4Q969E2 229 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 CREBZFQ9NS37 354 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 RHCGQ9UBD6 479 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 LGALS8O00214 317 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 EDIL3O43854 480 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM225BP0DP42 221 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 RPS23P62266 143 aaKnown RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 SSX2Q16385 188 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 RHOUQ7L0Q8 258 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF100Q8IYN0 542 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 ARIH2OSQ8N7S6 290 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 HMGB4Q8WW32 186 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 PSMF1Q92530 271 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF629Q9UEG4 869 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 PCDHGA5Q9Y5G8 931 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 SEMG1P04279 462 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 ADH4P08319 380 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 MRPL3P09001 348 aaKnown RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 CD22P20273 847 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 KITLGP21583 273 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 PNLIPRP2P54317 469 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 CLDN15P56746 228 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 KRBOX4Q5JUW0 171 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 C19orf47Q8N9M1 422 aaKnown RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 NMES1Q9C002 83 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 RNF19AQ9NV58 838 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 GATCO43716 136 aaKnown RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 FZD6O60353 706 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 PLATP00750 562 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 HPNP05981 417 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 PRDX3P30048 256 aaKnown RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 CD70P32970 193 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 TAS2R45P59539 299 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 SIGIRRQ6IA17 410 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF280BQ86YH2 543 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 OR51Q1Q8NH59 317 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 FAM216AQ8WUB2 273 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 HMGN4O00479 90 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 NDUFB6O95139 128 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 SELENBP1Q13228 472 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 OLIG2Q13516 323 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 IQCJQ1A5X6 159 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 TCTN3Q6NUS6 607 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 KDF1Q8NAX2 398 aaPredicted RBP8.09□□□□□ -1.11
COL6A5-202ENST00000312481 GLYATL2Q8WU03 294 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 BOCQ9BWV1 1114 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 CNMDO75829 334 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 RPL27P61353 136 aaKnown RBP8.09□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF674Q2M3X9 581 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 C17orf47Q8NEP4 570 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 TEAD3Q99594 435 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 CEP192Q8TEP8 1941 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 A0A0B4J2A0 478 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 TOX3O15405 576 aaPredicted RBP8.09□□□□□ -1.11
COL6A5-202ENST00000312481 AADACP22760 399 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 PPICP45877 212 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 SOX2P48431 317 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 CDKN1CP49918 316 aaPredicted RBP8.09□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM151BQ8IW70 566 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 CPNE4Q96A23 557 aaPredicted RBP8.09□□□□□ -1.11
COL6A5-202ENST00000312481 SPHK1Q9NYA1 384 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 SHPKQ9UHJ6 478 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 CEBPGP53567 150 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 HTD2P86397 168 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 BAP18Q8IXM2 172 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 CSF3RQ99062 836 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 NOX4Q9NPH5 578 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 KIR2DS2P43631 304 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM18Q96B42 140 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 POFUT1Q9H488 388 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 FZD1Q9UP38 647 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.09□□□□□ -1.11
COL6A5-202ENST00000312481 MMP9P14780 707 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 DRD5P21918 477 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 ARR3P36575 388 aa8.09□□□□□ -1.11
COL6A5-202ENST00000312481 DGKZQ13574 1117 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms