RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 OR14L1PQ8NHC6 308 aa18.95■□□□□ 0.62
ATG4D-201ENST00000309469 ORAI1Q96D31 301 aa18.95■□□□□ 0.62
ATG4D-201ENST00000309469 NEURL2Q9BR09 285 aa18.95■□□□□ 0.62
ATG4D-201ENST00000309469 PPP1R3EQ9H7J1 279 aa18.95■□□□□ 0.62
ATG4D-201ENST00000309469 TBC1D24Q9ULP9 559 aa18.95■□□□□ 0.62
ATG4D-201ENST00000309469 AK6Q9Y3D8 172 aaKnown RBP18.95■□□□□ 0.62
ATG4D-201ENST00000309469 ALPK2Q86TB3 2170 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 A0A0J9YW62 118 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 ZNF726A6NNF4 738 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 FAM25AB3EWG3 89 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 FAM25CB3EWG5 89 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 FAM25GB3EWG6 89 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 EPXP11678 715 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 SPNP16150 400 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 PTBP1P26599 531 aaKnown RBP eCLIP18.94■□□□□ 0.62
ATG4D-201ENST00000309469 CCR9P51686 369 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 RIDAP52758 137 aaKnown RBP18.94■□□□□ 0.62
ATG4D-201ENST00000309469 WDR38Q5JTN6 314 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 SPINK14Q6IE38 97 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 DCXRQ7Z4W1 244 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 CADM3Q8N126 398 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 C11orf40Q8WZ69 217 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 NAA11Q9BSU3 229 aaPredicted RBP18.94■□□□□ 0.62
ATG4D-201ENST00000309469 WNT11O96014 354 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 ITGA3P26006 1051 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 MAPK3P27361 379 aaPredicted RBP18.94■□□□□ 0.62
ATG4D-201ENST00000309469 APEX1P27695 318 aaKnown RBP18.94■□□□□ 0.62
ATG4D-201ENST00000309469 LAP3P28838 519 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 GABREP78334 506 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 AIMP2Q13155 320 aaKnown RBP18.94■□□□□ 0.62
ATG4D-201ENST00000309469 MADCAM1Q13477 382 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 CARD17Q5XLA6 110 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 OR7E24Q6IFN5 339 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 GDPD3Q7L5L3 318 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 LINC00346Q8IVM7 164 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 ST7LQ8TDW4 575 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 KCNE4Q8WWG9 221 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 MALT1Q9UDY8 824 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 MRPS18CQ9Y3D5 142 aaKnown RBP18.94■□□□□ 0.62
ATG4D-201ENST00000309469 LRP12Q9Y561 859 aa18.94■□□□□ 0.62
ATG4D-201ENST00000309469 ZNF318Q5VUA4 2279 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 PDCD5O14737 125 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 ZNF254O75437 659 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 VAMP5O95183 116 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 PNPP00491 289 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 CASRP41180 1078 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 LRRC28Q86X40 367 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-201ENST00000309469 RDH10Q8IZV5 341 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 OR10H5Q8NGA6 315 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 TRMT10AQ8TBZ6 339 aaKnown RBP18.93■□□□□ 0.62
ATG4D-201ENST00000309469 GPR148Q8TDV2 347 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 ZFP64Q9NPA5 681 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 ABI3Q9P2A4 366 aa18.93■□□□□ 0.62
ATG4D-201ENST00000309469 CACNA1HO95180 2353 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 PINLYPA6NC86 204 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 BOLA2-SMG1P6H3BVE0 249 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 TNFSF11O14788 317 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 NEURL1O76050 574 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 PAHP00439 452 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 CSF3P09919 207 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 ATF1P18846 271 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 SOX2P48431 317 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 CLDN17P56750 224 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 SCN1BQ07699 218 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 HIST3H3Q16695 136 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 SLC25A47Q6Q0C1 308 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 CCBE1Q6UXH8 406 aaPredicted RBP18.92■□□□□ 0.62
ATG4D-201ENST00000309469 SAMD12Q8N8I0 201 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 PRSS33Q8NF86 280 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 SLC39A7Q92504 469 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 UTP23Q9BRU9 249 aaKnown RBP18.92■□□□□ 0.62
ATG4D-201ENST00000309469 SLC25A18Q9H1K4 315 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 CYSLTR2Q9NS75 346 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 ABRACLQ9P1F3 81 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 IGHV3-15A0A0B4J1V0 119 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 A0A1W2PPL8 197 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 A0A1W2PQ09 198 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.92■□□□□ 0.62
ATG4D-201ENST00000309469 GPR171O14626 319 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 TLX3O43711 291 aaPredicted RBP18.92■□□□□ 0.62
ATG4D-201ENST00000309469 AGFG1P52594 562 aaKnown RBP18.92■□□□□ 0.62
ATG4D-201ENST00000309469 FOXO1Q12778 655 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 IL18Q14116 193 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 P2RY14Q15391 338 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 ODF4Q2M2E3 257 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 ZNF544Q6NX49 715 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 CREB3L2Q70SY1 520 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 MCHR2Q969V1 340 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 FER1L6-AS2Q96M78 137 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 UCN2Q96RP3 112 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 EXTL2Q9UBQ6 330 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 SLC22A13Q9Y226 551 aa18.92■□□□□ 0.62
ATG4D-201ENST00000309469 TRAPPC6AO75865 159 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 EIF4EP06730 217 aaKnown RBP18.91■□□□□ 0.62
ATG4D-201ENST00000309469 NPR2P20594 1047 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 CD82P27701 267 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 MFGE8Q08431 387 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-201ENST00000309469 MFAP5Q13361 173 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 RIN1Q13671 783 aa18.91■□□□□ 0.62
ATG4D-201ENST00000309469 POU4F3Q15319 338 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms