RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 WNT5BQ9H1J7 359 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 RNF121Q9H920 327 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 REV1Q9UBZ9 1251 aa16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 SAMD4AQ9UPU9 718 aaKnown RBP16.98■□□□□ 0.31
PDZRN3-202ENST00000308537 STAB1Q9NY15 2570 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 SLC22A23A1A5C7 686 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 IMPA2O14732 288 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 ZNF23P17027 643 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 UCP2P55851 309 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 GKAP1Q5VSY0 366 aaPredicted RBP16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 AKR7LQ8NHP1 331 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 FNDC8Q8TC99 324 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 UBASH3BQ8TF42 649 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 LRRC37BQ96QE4 947 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 NRIP3Q9NQ35 241 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 TMEM160Q9NX00 188 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 TAGLN3Q9UI15 199 aa16.97■□□□□ 0.31
PDZRN3-202ENST00000308537 A6NIZ1 184 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 ARPC2O15144 300 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 ICMTO60725 284 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 CST2P09228 141 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 NR2C1P13056 603 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 TCN1P20061 433 aaPredicted RBP16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 IL2RGP31785 369 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 RAP1BP61224 184 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 RAP1AP62834 184 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 CARTPTQ16568 116 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 SGCAQ16586 387 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 TBC1D28Q2M2D7 210 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 CYB5R2Q6BCY4 276 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 RGS7BPQ6MZT1 257 aaPredicted RBP16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 UGT2A3Q6UWM9 527 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 CYP4Z1Q86W10 505 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 PYURFQ96I23 114 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 RBP7Q96R05 134 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 CDRT15Q96T59 188 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 OR2H1Q9GZK4 316 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 OR51B6Q9H340 312 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 MS4A5Q9H3V2 200 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 CDH20Q9HBT6 801 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 POLE4Q9NR33 117 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 TMEM5Q9Y2B1 443 aa16.96■□□□□ 0.31
PDZRN3-202ENST00000308537 IQCMA0A1B0GVH7 501 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 LRP5LA4QPB2 252 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 PTHP01270 115 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 NAT2P11245 290 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 CTLA4P16410 223 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 IGFBP5P24593 272 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 COL8A2P25067 703 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 STOMP27105 288 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 TRIP10Q15642 601 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 FGD3Q5JSP0 725 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 ZER1Q7Z7L7 766 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 YIPF5Q969M3 257 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 RASD2Q96D21 266 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 ZNF416Q9BWM5 594 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 BCL2L14Q9BZR8 327 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 DUSP13Q9UII6 198 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 MAGEL2Q9UJ55 1249 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 V9GYQ6 96 aa16.95■□□□□ 0.3
PDZRN3-202ENST00000308537 PRSS37A4D1T9 235 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 RP2O75695 350 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 NDUFB2O95178 105 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 GZMKP49863 264 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 HSF2Q03933 536 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 PLP2Q04941 152 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 SAMD4BQ5PRF9 694 aaKnown RBP16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 PTCHD4Q6ZW05 846 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 RFPL4BQ6ZWI9 263 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 FITM2Q8N6M3 262 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 ZNF540Q8NDQ6 660 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 OR1J2Q8NGS2 313 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 GTF3AQ92664 365 aaKnown RBP16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 C1orf159Q96HA4 380 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 RSRC1Q96IZ7 334 aaKnown RBP16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 RACGAP1Q9H0H5 632 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 VSX1Q9NZR4 365 aaPredicted RBP16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 IL20RAQ9UHF4 553 aa16.94■□□□□ 0.3
PDZRN3-202ENST00000308537 TEX13CA0A0J9YWL9 993 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 AHCYL1O43865 530 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 TXNDC12O95881 172 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 IGHV3-13P01766 116 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 APEHP13798 732 aaKnown RBP16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 MSR1P21757 451 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 APLNRP35414 380 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 RPL4P36578 427 aaKnown RBP16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 MAGEB1P43366 347 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 ALKBH6Q3KRA9 238 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 ZNF774Q6NX45 483 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 DEFB107AQ8IZN7 70 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 OR52J3Q8NH60 311 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 SYNPRQ8TBG9 265 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 MARS2Q96GW9 593 aaKnown RBP16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 ZNF570Q96NI8 536 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 CCT8L2Q96SF2 557 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 EMC7Q9NPA0 242 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 CCNB1IP1Q9NPC3 277 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 TAAR3PQ9P1P4 343 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 GRHPRQ9UBQ7 328 aa16.93■□□□□ 0.3
PDZRN3-202ENST00000308537 FAM32AQ9Y421 112 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms