RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 RNF141Q8WVD5 230 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 KLF16Q9BXK1 252 aaPredicted RBP11.61□□□□□ -0.55
USP38-201ENST00000307017 SLC25A32Q9H2D1 315 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 ZCCHC4Q9H5U6 513 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 SLC22A11Q9NSA0 550 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 GPR171O14626 319 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 ABHD16AO95870 558 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 ATXN1LP0C7T5 689 aaKnown RBP11.61□□□□□ -0.55
USP38-201ENST00000307017 SMIM18P0DKX4 95 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 SLC6A8P48029 635 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 DUSP3P51452 185 aaPredicted RBP11.61□□□□□ -0.55
USP38-201ENST00000307017 ARL6IP1Q15041 203 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 TMEM207Q6UWW9 146 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 MBOAT2Q6ZWT7 520 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 ZNF534Q76KX8 674 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 TREM2Q9NZC2 230 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 SLC35A3Q9Y2D2 325 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 OR6C68A6NDL8 312 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 DEGS1O15121 323 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 RING1Q06587 406 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 Q1RN00 199 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 WFDC5Q8TCV5 224 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 FGF13Q92913 245 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 TM4SF18Q96CE8 201 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 UBQLN4Q9NRR5 601 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 LHX3Q9UBR4 397 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 GABARAPH6UMI1 98 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 J3KRW8 73 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 TNFSF11O14788 317 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 PIAS2O75928 621 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 GABARAPO95166 117 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 OR5G3P0C626 314 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 SLC25A6P12236 298 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 MPEG1Q2M385 716 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 TRMT12Q53H54 448 aaKnown RBP11.6□□□□□ -0.55
USP38-201ENST00000307017 MDGA2Q7Z553 956 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 SLC6A18Q96N87 628 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 UQCC2Q9BRT2 126 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 OR52A1Q9UKL2 312 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 POM121BA6NF01 834 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 INHBCP55103 352 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 LRRC26Q2I0M4 334 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 HBMQ6B0K9 141 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 ABHD6Q9BV23 337 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 MEGF11A6BM72 1044 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 SLC43A1O75387 559 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 RAP2BP61225 183 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 NT5DC2Q9H857 520 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 NENFQ9UMX5 172 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 A0A1B0GWA3 101 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 MMP7P09237 267 aaPredicted RBP11.6□□□□□ -0.55
USP38-201ENST00000307017 GP2P55259 537 aaKnown RBP11.6□□□□□ -0.55
USP38-201ENST00000307017 GNB2P62879 340 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 DOC2BQ14184 412 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 OR5B3Q8NH48 314 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 ITPKCQ96DU7 683 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 GPR55Q9Y2T6 319 aaPredicted RBP11.6□□□□□ -0.55
USP38-201ENST00000307017 MAN2B1O00754 1011 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 PPP1R2P9O14990 202 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 P2RX6O15547 441 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 MTHFD2P13995 350 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 CLVS2Q5SYC1 327 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.6□□□□□ -0.55
USP38-201ENST00000307017 PPT2Q9UMR5 302 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 EVPLQ92817 2033 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 FURINP09958 794 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 SYT6Q5T7P8 510 aaPredicted RBP11.6□□□□□ -0.55
USP38-201ENST00000307017 RPL22L1Q6P5R6 122 aaKnown RBP11.6□□□□□ -0.55
USP38-201ENST00000307017 C19orf35Q6ZS72 473 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 C20orf196Q8IYI0 205 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 CRLF2Q9HC73 371 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 CORINQ9Y5Q5 1042 aa11.6□□□□□ -0.55
USP38-201ENST00000307017 OR5K4A6NMS3 321 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 D6RAR5 112 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ZNF354AO60765 605 aaPredicted RBP11.59□□□□□ -0.55
USP38-201ENST00000307017 HOXA9P31269 272 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ZNF90Q03938 601 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ACSM6Q6P461 480 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 SLC16A11Q8NCK7 471 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 NUDCD2Q8WVJ2 157 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 BTF3L4Q96K17 158 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 BMFQ96LC9 184 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ZNF583Q96ND8 569 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ANKRD19PQ9H560 264 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 SLC5A10A0PJK1 596 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 PAPLNO95428 1278 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 HOXD9P28356 352 aaPredicted RBP11.59□□□□□ -0.55
USP38-201ENST00000307017 C19orf47Q8N9M1 422 aaKnown RBP11.59□□□□□ -0.55
USP38-201ENST00000307017 GMLQ99445 158 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 H3BMH7 237 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ANGPTL7O43827 346 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ADRA2CP18825 462 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 H2BFWTQ7Z2G1 175 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ADIPOR2Q86V24 386 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ZNF687Q8N1G0 1237 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 OR5K2Q8NHB8 316 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 IL23AQ9NPF7 189 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 NECAP2Q9NVZ3 263 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 PADI1Q9ULC6 663 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 EXO1Q9UQ84 846 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms