RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 NKX1-2Q9UD57 310 aaPredicted RBP19.48■□□□□ 0.71
HOXD4-201ENST00000306324 ROS1P08922 2347 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 MPZL1O95297 269 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 HLA-DQA2P01906 255 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 SCG5P05408 212 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 GYPBP06028 91 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 SSTR2P30874 369 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 PYCR1P32322 319 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 PTDSS1P48651 473 aaKnown RBP19.48■□□□□ 0.71
HOXD4-201ENST00000306324 RAB1AP62820 205 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 GLO1Q04760 184 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 BSPH1Q075Z2 132 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 SLC36A2Q495M3 483 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 FAM27BQ5VT28 67 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 SLX4IPQ5VYV7 408 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 OTPQ5XKR4 325 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 TMEM108Q6UXF1 575 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.48■□□□□ 0.71
HOXD4-201ENST00000306324 TMEM200AQ86VY9 491 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 GALNT4Q8N4A0 578 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 OR51L1Q8NGJ5 315 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 NOX3Q9HBY0 568 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 RTTNQ86VV8 2226 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 DPRXA6NFQ7 191 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 PRR23D1E9PI22 279 aaPredicted RBP19.47■□□□□ 0.71
HOXD4-201ENST00000306324 MGRN1O60291 552 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 CTAG2O75638 210 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 RAB36O95755 333 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 HRGP04196 525 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 PRR23D2P0DMB1 279 aaPredicted RBP19.47■□□□□ 0.71
HOXD4-201ENST00000306324 CLUP10909 449 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 CBR1P16152 277 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 PAX7P23759 505 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 IDH3GP51553 393 aaPredicted RBP19.47■□□□□ 0.71
HOXD4-201ENST00000306324 NR1H2P55055 460 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 PLBD1Q6P4A8 553 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 UGT2A3Q6UWM9 527 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 ZNF416Q9BWM5 594 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 HCAR1Q9BXC0 346 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 NMNAT2Q9BZQ4 307 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 MOV10Q9HCE1 1003 aaKnown RBP19.47■□□□□ 0.71
HOXD4-201ENST00000306324 CCNB1IP1Q9NPC3 277 aa19.47■□□□□ 0.71
HOXD4-201ENST00000306324 ABCA12Q86UK0 2595 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 M0R129 80 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 GOSR1O95249 250 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 PRF1P14222 555 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 SPI1P17947 270 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 ARR3P36575 388 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 SLC25A1P53007 311 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 SLC34A1Q06495 639 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 NCMAPQ5T1S8 102 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 TMEM53Q6P2H8 277 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 ZNRF4Q8WWF5 429 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 C11orf40Q8WZ69 217 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 FBXO17Q96EF6 278 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 HS3ST6Q96QI5 342 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 TOR3AQ9H497 397 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 RNPEPL1Q9HAU8 725 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 RASSF1Q9NS23 344 aa19.46■□□□□ 0.71
HOXD4-201ENST00000306324 FBN2P35556 2912 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 IGHV1-18A0A0C4DH31 117 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 FAM221AA4D161 298 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 SNAP29O95721 258 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 IGKV3-15P01624 115 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 CD3EP07766 207 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 CELA3BP08861 270 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 CST2P09228 141 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 PTAFRP25105 342 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 CD40P25942 277 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 HSF2Q03933 536 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 MEP1BQ16820 701 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 C12orf73Q69YU5 71 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 DPPA2Q7Z7J5 298 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 CPOQ8IVL8 374 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 PTP4A1Q93096 173 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 OR51V1Q9H2C8 321 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 CLEC4MQ9H2X3 399 aaPredicted RBP19.45■□□□□ 0.7
HOXD4-201ENST00000306324 HINT3Q9NQE9 182 aaKnown RBP19.45■□□□□ 0.7
HOXD4-201ENST00000306324 CRNNQ9UBG3 495 aaPredicted RBP19.45■□□□□ 0.7
HOXD4-201ENST00000306324 POLR1DQ9Y2S0 133 aa19.45■□□□□ 0.7
HOXD4-201ENST00000306324 C12orf71A8MTZ7 269 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 ABCD4O14678 606 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 CASQ2O14958 399 aaPredicted RBP19.44■□□□□ 0.7
HOXD4-201ENST00000306324 PRKYO43930 277 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 GAAP10253 952 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 ZNF32P17041 273 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 LOXP28300 417 aaPredicted RBP19.44■□□□□ 0.7
HOXD4-201ENST00000306324 ENDOGQ14249 297 aaKnown RBP19.44■□□□□ 0.7
HOXD4-201ENST00000306324 CXXC5Q7LFL8 322 aaKnown RBP19.44■□□□□ 0.7
HOXD4-201ENST00000306324 MYPOPQ86VE0 399 aaPredicted RBP19.44■□□□□ 0.7
HOXD4-201ENST00000306324 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
HOXD4-201ENST00000306324 FAM169BQ8N8A8 192 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 TCEANCQ8N8B7 351 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 SLC26A10Q8NG04 563 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 OR10H5Q8NGA6 315 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 OR6K6Q8NGW6 343 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 MBOAT4Q96T53 435 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 GRIP2Q9C0E4 1043 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 PLCE1Q9P212 2302 aa19.44■□□□□ 0.7
HOXD4-201ENST00000306324 SETXQ7Z333 2677 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms