RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CNRIP1Q96F85 164 aaPredicted RBP14.56□□□□□ -0.08
USP42-201ENST00000306177 CGGBP1Q9UFW8 167 aaPredicted RBP14.56□□□□□ -0.08
USP42-201ENST00000306177 COPS3Q9UNS2 423 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 PCDHGA5Q9Y5G8 931 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 PRICKLE3O43900 615 aaPredicted RBP14.56□□□□□ -0.08
USP42-201ENST00000306177 PMS2P2O95744 297 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 YRDCQ86U90 279 aaKnown RBP14.56□□□□□ -0.08
USP42-201ENST00000306177 ANKRD9Q96BM1 317 aaPredicted RBP14.56□□□□□ -0.08
USP42-201ENST00000306177 ZMAT3Q9HA38 289 aaKnown RBP14.56□□□□□ -0.08
USP42-201ENST00000306177 SHROOM3Q8TF72 1996 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 A0A0A6YYD5 115 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 POU3F3P20264 500 aaPredicted RBP14.56□□□□□ -0.08
USP42-201ENST00000306177 GFERP55789 205 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 FCN2Q15485 313 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 FAHD1Q6P587 224 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 ZNF683Q8IZ20 524 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 WWTR1Q9GZV5 400 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 SCN1AP35498 2009 aa14.56□□□□□ -0.08
USP42-201ENST00000306177 SPTY2D1-AS1A0A0U1RR47 76 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 LOC107986453A0A1B0GWG9 222 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 PMP2P02689 132 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 SERPINA7P05543 415 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 RPL18Q07020 188 aaKnown RBP14.55□□□□□ -0.08
USP42-201ENST00000306177 PDLIM3Q53GG5 364 aaPredicted RBP14.55□□□□□ -0.08
USP42-201ENST00000306177 SPNS1Q9H2V7 528 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 MOB1AQ9H8S9 216 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 DUSP13Q9UII6 198 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 PNLIPRP2P54317 469 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 BDH1Q02338 343 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 IP6K3Q96PC2 410 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 ISYNA1Q9NPH2 558 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 NECAP2Q9NVZ3 263 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 COQ3Q9NZJ6 369 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 GHRLQ9UBU3 117 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 PPIL1Q9Y3C6 166 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 SNAPINO95295 136 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 TPOP07202 933 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 TAS2R30P59541 319 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 ZNF674Q2M3X9 581 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 SYS1Q8N2H4 156 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 ANKRD53Q8N9V6 530 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 C8orf44Q96CB5 159 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 ARPC5LQ9BPX5 153 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 EMC7Q9NPA0 242 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 FADS1O60427 444 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 QDPRP09417 244 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 THEM4Q5T1C6 240 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 CPNE4Q96A23 557 aaPredicted RBP14.55□□□□□ -0.08
USP42-201ENST00000306177 SLAMF6Q96DU3 332 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 CNTNAP3Q9BZ76 1288 aa14.55□□□□□ -0.08
USP42-201ENST00000306177 FRG2CA6NGY1 282 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 GPX5O75715 221 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 ANKRD34AQ69YU3 496 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 PAQR6Q6TCH4 344 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 MDGA2Q7Z553 956 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 HRH3Q9Y5N1 445 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 RP1L1Q8IWN7 2480 aaPredicted RBP14.54□□□□□ -0.08
USP42-201ENST00000306177 LILRA5A6NI73 299 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 HCCSP53701 268 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 Q6ZS52 159 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 KIAA1958Q8N8K9 716 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 OR11A1Q9GZK7 315 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 TAS2R4Q9NYW5 299 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 MCM3APO60318 1980 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 A0A0B4J2A0 478 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 ANKRD33BA6NCL7 494 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 EDN3P14138 238 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 HTR4Q13639 388 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 RNLSQ5VYX0 342 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 ALKAL2Q6UX46 152 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 Q6ZNX1 250 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 TMEM179BQ7Z7N9 219 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 UBL7Q96S82 380 aaPredicted RBP14.54□□□□□ -0.08
USP42-201ENST00000306177 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.54□□□□□ -0.086e-7■■■□□ 14.8
USP42-201ENST00000306177 BIN3Q9NQY0 253 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 FAM212BQ9NTI7 297 aaPredicted RBP14.54□□□□□ -0.08
USP42-201ENST00000306177 SHPKQ9UHJ6 478 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 A0A0U1RQK1 487 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 OR6C6A6NF89 314 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 METTL12A8MUP2 240 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 GABARAPH6UMI1 98 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 TUSC2O75896 110 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 GABRG2P18507 467 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 KITLGP21583 273 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 HOXD12P35452 270 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 GPR85P60893 370 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 TMEM81Q6P7N7 255 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 SYT13Q7L8C5 426 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 BBS1Q8NFJ9 593 aa14.54□□□□□ -0.08
USP42-201ENST00000306177 RBMXL1Q96E39 390 aaKnown RBP14.54□□□□□ -0.08
USP42-201ENST00000306177 PTPRZ1P23471 2315 aaPredicted RBP14.54□□□□□ -0.08
USP42-201ENST00000306177 IGHV3-9P01782 118 aa14.53□□□□□ -0.08
USP42-201ENST00000306177 PRR35P0CG20 571 aa14.53□□□□□ -0.08
USP42-201ENST00000306177 SOWAHCQ53LP3 525 aaPredicted RBP14.53□□□□□ -0.08
USP42-201ENST00000306177 TMEM71Q6P5X7 295 aa14.53□□□□□ -0.08
USP42-201ENST00000306177 OGFOD3Q6PK18 319 aa14.53□□□□□ -0.08
USP42-201ENST00000306177 PRSS35Q8N3Z0 413 aa14.53□□□□□ -0.08
USP42-201ENST00000306177 OR51A2Q8NGJ7 313 aa14.53□□□□□ -0.08
USP42-201ENST00000306177 HAS2Q92819 552 aa14.53□□□□□ -0.08
USP42-201ENST00000306177 USB1Q9BQ65 265 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms