RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 COL4A6Q14031 1691 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 A0A1W2PQ09 198 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 C5orf51A6NDU8 294 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 OR6C6A6NF89 314 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 TUBAL3A6NHL2 446 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 H3BSA7 217 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 PRICKLE3O43900 615 aaPredicted RBP8.34□□□□□ -1.07
PTPRE-202ENST00000306042 ANXA3P12429 323 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 GNRHRP30968 328 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 GTPBP8Q8N3Z3 284 aaPredicted RBP8.34□□□□□ -1.07
PTPRE-202ENST00000306042 HTRA1Q92743 480 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 TFAP2CQ92754 450 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 SLC35B4Q969S0 331 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 DCLRE1CQ96SD1 692 aaKnown RBP8.34□□□□□ -1.07
PTPRE-202ENST00000306042 UFSP2Q9NUQ7 469 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 KCNIP3Q9Y2W7 256 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 PI4KAP42356 2102 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 L7N2F9 121 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 WISP3O95389 354 aaPredicted RBP8.34□□□□□ -1.07
PTPRE-202ENST00000306042 CT45A8P0DMV1 189 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 CT45A9P0DMV2 189 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 COX6A1P12074 109 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 SPI1P17947 270 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 LIMK1P53667 647 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 LGALS4P56470 323 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 VAMP2P63027 116 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 PMPCAQ10713 525 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 NTRK2Q16620 822 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 CDNFQ49AH0 187 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 CT45A2Q5DJT8 189 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 SIMC1Q8NDZ2 872 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 KCNG2Q9UJ96 466 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 PIGLQ9Y2B2 252 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 DNAJB6O75190 326 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 CTSBP07858 339 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 GUSBP08236 651 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 ZFP36L2P47974 494 aaKnown RBP8.34□□□□□ -1.07
PTPRE-202ENST00000306042 CD226Q15762 336 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 FAM198BQ6UWH4 519 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 IQCF2Q8IXL9 164 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 FDCSPQ8NFU4 85 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 SEMA6DQ8NFY4 1073 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 UTP4Q969X6 686 aaKnown RBP8.34□□□□□ -1.07
PTPRE-202ENST00000306042 LGALS12Q96DT0 336 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF681Q96N22 645 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 TEAD3Q99594 435 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 RHBDD3Q9Y3P4 386 aa8.34□□□□□ -1.07
PTPRE-202ENST00000306042 CD3EP07766 207 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 DNASE1P24855 282 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 IL2RGP31785 369 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 IKZF1Q13422 519 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 OR2G6Q5TZ20 316 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 XKRXQ6PP77 449 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 PPP1R32Q7Z5V6 425 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 HPS1Q92902 700 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 SORCS2Q96PQ0 1159 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 OR10A4Q9H209 315 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 FBXL2Q9UKC9 423 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 KLK13Q9UKR3 277 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 ZFHX2Q9C0A1 2572 aaPredicted RBP8.33□□□□□ -1.08
PTPRE-202ENST00000306042 TRAV18A0A075B6X5 111 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 A0A1W2PR80 420 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 ORC5O43913 435 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 COL19A1Q14993 1142 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 RAB35Q15286 201 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 SHBQ15464 509 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 CCDC36Q8IYA8 594 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 OR1J1Q8NGS3 322 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 ITFG2Q969R8 447 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 TSSK2Q96PF2 358 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 SLC30A2Q9BRI3 323 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 HIF3AQ9Y2N7 669 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF182P17025 639 aaPredicted RBP8.33□□□□□ -1.08
PTPRE-202ENST00000306042 S100A7P31151 101 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 MRPL19P49406 292 aaKnown RBP8.33□□□□□ -1.08
PTPRE-202ENST00000306042 EDDM3BP56851 147 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 FXYD6P3P58550 94 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 SMN1Q16637 294 aaKnown RBP8.33□□□□□ -1.08
PTPRE-202ENST00000306042 BAIAP2L2Q6UXY1 529 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 USP51Q70EK9 711 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 SSX6Q7RTT6 188 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 ASCL5Q7RTU5 278 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 TMEM251Q8N6I4 163 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 IL1F10Q8WWZ1 152 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 GGHQ92820 318 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 TMEM106AQ96A25 262 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 C12orf10Q9HB07 376 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 ERRFI1Q9UJM3 462 aaPredicted RBP8.33□□□□□ -1.08
PTPRE-202ENST00000306042 CES1P1Q9UKY3 287 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 BDP1A6H8Y1 2624 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 NPIPB8E9PQR5 432 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 MPPED1O15442 326 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 XRCC2O43543 280 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 WDR1O75083 606 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF254O75437 659 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 SLC2A10O95528 541 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 C21orf33P30042 268 aaPredicted RBP8.33□□□□□ -1.08
PTPRE-202ENST00000306042 BDKRB2P30411 391 aa8.33□□□□□ -1.08
PTPRE-202ENST00000306042 SEC61A1P61619 476 aaKnown RBP8.33□□□□□ -1.08
PTPRE-202ENST00000306042 C1orf185Q5T7R7 199 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms