RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 HLA-CQ95604 372 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 COX14Q96I36 57 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 ZNF285Q96NJ3 590 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 PBDC1Q9BVG4 233 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 PLEK2Q9NYT0 353 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 WDR81Q562E7 1941 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 ERVH48-1M5A8F1 160 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 SLC26A5P58743 744 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 RPL27P61353 136 aaKnown RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 ARL6IP1Q15041 203 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 PPA1Q15181 289 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 C1orf140Q5VVS0 124 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 CORO6Q6QEF8 472 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 ANGPTL5Q86XS5 388 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 SLC22A8Q8TCC7 542 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 RNF141Q8WVD5 230 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 NXF5Q9H1B4 397 aaKnown RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 ALKBH4Q9NXW9 302 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 SLCO1C1Q9NYB5 712 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 KIF25Q9UIL4 384 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 LOC107986453A0A1B0GWG9 222 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 SULT2B1O00204 365 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 RAG2P55895 527 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 HSD17B7P56937 341 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 FAM209AQ5JX71 171 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 DMKNQ6E0U4 476 aaPredicted RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 MEX3BQ6ZN04 569 aaKnown RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 PRSS42Q7Z5A4 293 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 SLC22A24Q8N4F4 322 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 ARIH2OSQ8N7S6 290 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 ZNF578Q96N58 590 aaPredicted RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 MRPS28Q9Y2Q9 187 aaKnown RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 MRPS2Q9Y399 296 aaKnown RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 A0A1W2PPV9 198 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 A8MVM7 634 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 XRCC3O43542 346 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 NAGAP17050 411 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 CD1CP29017 333 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 BIDP55957 195 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 SNTB1Q13884 538 aaKnown RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 PDCD11Q14690 1871 aaKnown RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 ZNF649Q9BS31 505 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 OR11A1Q9GZK7 315 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 KCNJ16Q9NPI9 418 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 OR5V1Q9UGF6 321 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 FAM230AA0A1W2PPH8 454 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 BHLHE40O14503 412 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 NDUFB6O95139 128 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 LCATP04180 440 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 ADRB1P08588 477 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 DLX2Q07687 328 aaPredicted RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 ZIC1Q15915 447 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 MR1Q95460 341 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 S100PBPQ96BU1 408 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 SYT3Q9BQG1 590 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 EMC6Q9BV81 110 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 C1QTNF6Q9BXI9 259 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 MRPS18AQ9NVS2 196 aaKnown RBP12.09□□□□□ -0.47
DDX54-201ENST00000306014 RAB22AQ9UL26 194 aa12.09□□□□□ -0.47
DDX54-201ENST00000306014 PLXNA1Q9UIW2 1896 aa12.08□□□□□ -0.47
DDX54-201ENST00000306014 A0A087WUJ7 227 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 PRAMEF27A3QJZ7 478 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 TNFRSF10CO14798 259 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 DRD3P35462 400 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 NKAIN2Q5VXU1 208 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 H3F3CQ6NXT2 135 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 NT5CQ8TCD5 201 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 NUDCD2Q8WVJ2 157 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 ST8SIA2Q92186 375 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 SPACA5Q96QH8 159 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 NKX6-2Q9C056 277 aaPredicted RBP12.08□□□□□ -0.48
DDX54-201ENST00000306014 ZNF638Q14966 1978 aaKnown RBP12.08□□□□□ -0.48
DDX54-201ENST00000306014 IGHG1P01857 330 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 CTHP32929 405 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 HTRA4P83105 476 aaPredicted RBP12.08□□□□□ -0.48
DDX54-201ENST00000306014 PEA15Q15121 130 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 PLA1AQ53H76 456 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 SNIP1Q8TAD8 396 aaKnown RBP12.08□□□□□ -0.48
DDX54-201ENST00000306014 CRB3Q9BUF7 120 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 DNTTIP1Q9H147 329 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 FOXJ3Q9UPW0 622 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 CABIN1Q9Y6J0 2220 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 K7EPK0 472 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 EEF1A1P68104 462 aaKnown RBP12.08□□□□□ -0.48
DDX54-201ENST00000306014 FJX1Q86VR8 437 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 CDH26Q8IXH8 852 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 FAM71E2Q8N5Q1 922 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 FAM71CQ8NEG0 241 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 TMED6Q8WW62 240 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 ZNF764Q96H86 408 aaPredicted RBP12.08□□□□□ -0.48
DDX54-201ENST00000306014 OR2A5Q96R48 311 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 PIGMQ9H3S5 423 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 BANF2Q9H503 90 aa12.08□□□□□ -0.48
DDX54-201ENST00000306014 SLC33A1O00400 549 aaPredicted RBP12.07□□□□□ -0.48
DDX54-201ENST00000306014 BLVRBP30043 206 aaPredicted RBP12.07□□□□□ -0.48
DDX54-201ENST00000306014 ACSM1Q08AH1 577 aa12.07□□□□□ -0.48
DDX54-201ENST00000306014 MESP2Q0VG99 397 aa12.07□□□□□ -0.48
DDX54-201ENST00000306014 LGALSLQ3ZCW2 172 aaPredicted RBP12.07□□□□□ -0.48
DDX54-201ENST00000306014 TMEM196Q5HYL7 178 aa12.07□□□□□ -0.48
DDX54-201ENST00000306014 SFRP5Q5T4F7 317 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms