RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PHYHO14832 338 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 EIF3GO75821 320 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS50-202ENST00000305866 IFNGP01579 166 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 CD3DP04234 171 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 IFNA16P05015 189 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 OR4E1P0C645 316 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ZNF17P17021 662 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ITPKBP27987 946 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 S100A12P80511 92 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 HYAL1Q12794 435 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 SGCGQ13326 291 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ALKBH1Q13686 389 aaKnown RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 CCINQ13939 588 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 GPR18Q14330 331 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 GPR68Q15743 365 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ZNF74Q16587 644 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 Q499Y3 187 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 KLHL12Q53G59 568 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 EEF1A1P5Q5VTE0 462 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 C11orf87Q6NUJ2 197 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 BTNL8Q6UX41 500 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 MVB12AQ96EY5 273 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 PIK3IP1Q96FE7 263 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 MRPL48Q96GC5 212 aaKnown RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 NMNAT3Q96T66 252 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 SLC6A7Q99884 636 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 IFT27Q9BW83 186 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 GPR174Q9BXC1 333 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 LAT2Q9GZY6 243 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 SRMSQ9H3Y6 488 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 SCPEP1Q9HB40 452 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 CACYBPQ9HB71 228 aaKnown RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 KCNK6Q9Y257 313 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 MMACHCQ9Y4U1 282 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 CELSR3Q9NYQ7 3312 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 TEX13DA0A0J9YY54 714 aaPredicted RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 SPTY2D1-AS1A0A0U1RR47 76 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 RIIAD1A6NNX1 92 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 LINC00587B1AMM8 73 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 RPL36A-HNRNPH2H7BZ11 118 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 TSPAN4O14817 238 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 KCNAB3O43448 404 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 CREBL2O60519 120 aaPredicted RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 ERAL1O75616 437 aaKnown RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 PAK4O96013 591 aaPredicted RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 ZNF44P15621 663 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 BDKRB2P30411 391 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 CASRP41180 1078 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 POLR2GP62487 172 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS50-202ENST00000305866 OC90Q02509 493 aaPredicted RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 MFGE8Q08431 387 aaPredicted RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 INPP5JQ15735 1006 aaPredicted RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 PLEKHN1Q494U1 663 aaPredicted RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 SLC25A53Q5H9E4 307 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 YOD1Q5VVQ6 348 aaPredicted RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 TMEM268Q5VZI3 342 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 TMPRSS9Q7Z410 1059 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 LINC00469Q8N7U9 141 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 ZSCAN4Q8NAM6 433 aaPredicted RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 OR51S1Q8NGJ8 323 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 OR2G2Q8NGZ5 317 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 COQ8AQ8NI60 647 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 MITD1Q8WV92 249 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 FCAMRQ8WWV6 532 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 PPP1R14AQ96A00 147 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 TCTN2Q96GX1 697 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 C4orf45Q96LM5 186 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 TTTY10Q9BZA0 68 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 POFUT1Q9H488 388 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 IFT22Q9H7X7 185 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 TMEM27Q9HBJ8 222 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 HPF1Q9NWY4 346 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 TRBV2A0A0J9YWF9 115 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 POM121BA6NF01 834 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 SERINC4A6NH21 518 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 MSGN1A6NI15 193 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 FIGNL2A6NMB9 653 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 F5H5P2 479 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 L7N2F9 121 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 NUPL2O15504 423 aaKnown RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 ARPC5O15511 151 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 EFSO43281 561 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 PRAMEF2O60811 474 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 IGLV3-1P01715 115 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 BGLAPP02818 100 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 RAB13P51153 203 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 PSMA6P60900 246 aaKnown RBP4.88□□□□□ -1.63
VPS50-202ENST00000305866 HSD11B2P80365 405 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 NAAAQ02083 359 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 STX4Q12846 297 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 DHRS2Q13268 280 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 WDR38Q5JTN6 314 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 SLC25A25Q6KCM7 469 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 TSSK4Q6SA08 328 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 PARM1Q6UWI2 310 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 DRAM2Q6UX65 266 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 LHFPL1Q86WI0 220 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 CBLN2Q8IUK8 224 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 MISPQ8IVT2 679 aa4.88□□□□□ -1.63
VPS50-202ENST00000305866 OR1J2Q8NGS2 313 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms