RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 TFF3Q07654 80 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 ANKRD16Q6P6B7 361 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 BCL2L2Q92843 193 aaPredicted RBP23.78■■□□□ 1.4
HDAC3-201ENST00000305264 SH3GL3Q99963 347 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 AMBNQ9NP70 447 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 COMMD3-BMI1R4GMX3 469 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 HELZ2Q9BYK8 2649 aaKnown RBP23.78■■□□□ 1.4
HDAC3-201ENST00000305264 SH3D21A4FU49 640 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 SLC22A31A6NKX4 558 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 MSR1P21757 451 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 LRRC18Q8N456 261 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 RFKQ969G6 155 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 Q96MT0 163 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 WDR76Q9H967 626 aa23.78■■□□□ 1.4
HDAC3-201ENST00000305264 LRRK2Q5S007 2527 aa23.77■■□□□ 1.4
HDAC3-201ENST00000305264 HCFC1P51610 2035 aa23.77■■□□□ 1.4
HDAC3-201ENST00000305264 NPR2P20594 1047 aa23.77■■□□□ 1.4
HDAC3-201ENST00000305264 UGT2B10P36537 528 aa23.77■■□□□ 1.4
HDAC3-201ENST00000305264 LCN1P1Q5VSP4 162 aa23.77■■□□□ 1.4
HDAC3-201ENST00000305264 C1orf162Q8NEQ5 155 aaPredicted RBP23.77■■□□□ 1.4
HDAC3-201ENST00000305264 SIAEQ9HAT2 523 aa23.77■■□□□ 1.4
HDAC3-201ENST00000305264 UBAP1Q9NZ09 502 aa23.77■■□□□ 1.4
HDAC3-201ENST00000305264 WIPF3A6NGB9 483 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 PSKH1P11801 424 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 IL32P24001 234 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 GUCA1AP43080 201 aaPredicted RBP23.76■■□□□ 1.39
HDAC3-201ENST00000305264 TEKQ02763 1124 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 ZNF91Q05481 1191 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 TBRG1Q3YBR2 411 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 RNASE6Q93091 150 aaKnown RBP23.76■■□□□ 1.39
HDAC3-201ENST00000305264 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.76■■□□□ 1.39
HDAC3-201ENST00000305264 LRRC42Q9Y546 428 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 SELENOFO60613 162 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 APOL3O95236 402 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 MRPL3P09001 348 aaKnown RBP23.76■■□□□ 1.39
HDAC3-201ENST00000305264 OR8G3PP0DMU2 310 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 NAA10P41227 235 aaPredicted RBP23.76■■□□□ 1.39
HDAC3-201ENST00000305264 RPS27P42677 84 aaKnown RBP23.76■■□□□ 1.39
HDAC3-201ENST00000305264 NRN1LQ496H8 165 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 KRT80Q6KB66 452 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 SKA3Q8IX90 412 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 S100PBPQ96BU1 408 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 ZNF416Q9BWM5 594 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 ZNF224Q9NZL3 707 aa23.76■■□□□ 1.39
HDAC3-201ENST00000305264 WARS2Q9UGM6 360 aaKnown RBP23.76■■□□□ 1.39
HDAC3-201ENST00000305264 HRGP04196 525 aa23.75■■□□□ 1.39
HDAC3-201ENST00000305264 BLVRAP53004 296 aa23.75■■□□□ 1.39
HDAC3-201ENST00000305264 ENDOGQ14249 297 aaKnown RBP23.75■■□□□ 1.39
HDAC3-201ENST00000305264 GGTLC2Q14390 218 aa23.75■■□□□ 1.39
HDAC3-201ENST00000305264 KCNMB1Q16558 191 aa23.75■■□□□ 1.39
HDAC3-201ENST00000305264 FAM27BQ5VT28 67 aa23.75■■□□□ 1.39
HDAC3-201ENST00000305264 OR7E24Q6IFN5 339 aa23.75■■□□□ 1.39
HDAC3-201ENST00000305264 ERI1Q8IV48 349 aaKnown RBP23.75■■□□□ 1.39
HDAC3-201ENST00000305264 TIGD4Q8IY51 512 aa23.75■■□□□ 1.39
HDAC3-201ENST00000305264 MARCH7Q9H992 704 aa23.75■■□□□ 1.39
HDAC3-201ENST00000305264 PRR14LQ5THK1 2151 aa23.75■■□□□ 1.39
HDAC3-201ENST00000305264 A0A1W2PR80 420 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 ZNF503-AS2A6NEH8 195 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 C16orf97H3BN30 126 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 DBTP11182 482 aaKnown RBP23.74■■□□□ 1.39
HDAC3-201ENST00000305264 TUBA1BP68363 451 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 TUBA4AP68366 448 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 ADAM8P78325 824 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 TUBA1AQ71U36 451 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 SMAP2Q8WU79 429 aaPredicted RBP23.74■■□□□ 1.39
HDAC3-201ENST00000305264 HDHD5Q9BXW7 423 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 ACTR6Q9GZN1 396 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 FARS2O95363 451 aaKnown RBP23.74■■□□□ 1.39
HDAC3-201ENST00000305264 MTNR1AP48039 350 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 SHFQ7M4L6 423 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 OR51G2Q8NGK0 314 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 FGFBP3Q8TAT2 258 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 RNFT2Q96EX2 444 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 BOD1Q96IK1 185 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 INTS14Q96SY0 518 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 RHNO1Q9BSD3 238 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 ADGRL4Q9HBW9 690 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 HAO2Q9NYQ3 351 aa23.74■■□□□ 1.39
HDAC3-201ENST00000305264 COL12A1Q99715 3063 aa23.73■■□□□ 1.39
HDAC3-201ENST00000305264 SNTNA6NMZ2 147 aa23.73■■□□□ 1.39
HDAC3-201ENST00000305264 XPNPEP2O43895 674 aa23.73■■□□□ 1.39
HDAC3-201ENST00000305264 PATE4P0C8F1 98 aa23.73■■□□□ 1.39
HDAC3-201ENST00000305264 C6orf141Q5SZD1 244 aa23.73■■□□□ 1.39
HDAC3-201ENST00000305264 OR10H5Q8NGA6 315 aa23.73■■□□□ 1.39
HDAC3-201ENST00000305264 FBXO17Q96EF6 278 aa23.73■■□□□ 1.39
HDAC3-201ENST00000305264 SLC17A5Q9NRA2 495 aa23.73■■□□□ 1.39
HDAC3-201ENST00000305264 POLR1DQ9Y2S0 133 aa23.73■■□□□ 1.39
HDAC3-201ENST00000305264 CLEC18AA5D8T8 446 aa23.72■■□□□ 1.39
HDAC3-201ENST00000305264 HLA-HP01893 362 aa23.72■■□□□ 1.39
HDAC3-201ENST00000305264 LSM6P62312 80 aaKnown RBP23.72■■□□□ 1.39
HDAC3-201ENST00000305264 MED21Q13503 144 aa23.72■■□□□ 1.39
HDAC3-201ENST00000305264 CLEC18BQ6UXF7 455 aa23.72■■□□□ 1.39
HDAC3-201ENST00000305264 SLC16A14Q7RTX9 510 aa23.72■■□□□ 1.39
HDAC3-201ENST00000305264 LINC00346Q8IVM7 164 aa23.72■■□□□ 1.39
HDAC3-201ENST00000305264 C17orf78Q8N4C9 275 aa23.72■■□□□ 1.39
HDAC3-201ENST00000305264 CLEC18CQ8NCF0 446 aa23.72■■□□□ 1.39
HDAC3-201ENST00000305264 STEAP2Q8NFT2 490 aa23.72■■□□□ 1.39
HDAC3-201ENST00000305264 OR6N2Q8NGY6 317 aa23.72■■□□□ 1.39
HDAC3-201ENST00000305264 CNN2Q99439 309 aaKnown RBP23.72■■□□□ 1.39
HDAC3-201ENST00000305264 NPDC1Q9NQX5 325 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms