RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LALBAP00709 142 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 RPA2P15927 270 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 BDH1Q02338 343 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 ZNF266Q14584 549 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 FBXO8Q9NRD0 319 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 CHRNA9Q9UGM1 479 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 BTAF1O14981 1849 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 CYB5BO43169 146 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 ETHE1O95571 254 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 PRSS35Q8N3Z0 413 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 SCARB1Q8WTV0 552 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 DCBLD2Q96PD2 775 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 TMEM43Q9BTV4 400 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 TMEM200CA6NKL6 621 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 CHRM2P08172 466 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 SYT13Q7L8C5 426 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 ELSPBP1Q96BH3 223 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 LAMB1P07942 1786 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 HSF1Q00613 529 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 OR2L13Q8N349 312 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 USB1Q9BQ65 265 aaKnown RBP12.75□□□□□ -0.37
PRKCB-201ENST00000303531 OR11A1Q9GZK7 315 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 PADI1Q9ULC6 663 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 A0A1B0GTL3 188 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 SDHAP31040 664 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 TCTN3Q6NUS6 607 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 GDPD3Q7L5L3 318 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 CPEB2Q7Z5Q1 589 aaKnown RBP12.75□□□□□ -0.37
PRKCB-201ENST00000303531 FJX1Q86VR8 437 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 SEMA4CQ9C0C4 833 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 TWSG1Q9GZX9 223 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 GPR171O14626 319 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 TRAPPC2P0DI81 140 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 TRAPPC2BP0DI82 140 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 BSGP35613 385 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 C1QBP02746 253 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 DOK3Q7L591 496 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 PTOV1Q86YD1 416 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 SEMA6DQ8NFY4 1073 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 C12orf49Q9H741 205 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 SLAMF7Q9NQ25 335 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 TAS2R5Q9NYW4 299 aa12.75□□□□□ -0.37
PRKCB-201ENST00000303531 EVPLQ92817 2033 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 ENSAO43768 121 aaKnown RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 CD22P20273 847 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 DPPA2Q7Z7J5 298 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 TMEM200AQ86VY9 491 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 SLC25A43Q8WUT9 341 aaPredicted RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 BCL7CQ8WUZ0 217 aaPredicted RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 SUCNR1Q9BXA5 334 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 STMND1H3BQB6 276 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 AADACP22760 399 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 CYB561P49447 251 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 RRADP55042 308 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 EXT1Q16394 746 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 TMEM81Q6P7N7 255 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 RHOUQ7L0Q8 258 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 MAML2Q8IZL2 1156 aaPredicted RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 LGI3Q8N145 548 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 ZNF808Q8N4W9 903 aaPredicted RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 BHLHE23Q8NDY6 225 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 GNG13Q9P2W3 67 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 DUSP13Q9UII6 198 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 IGHV3-9P01782 118 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 TCN2P20062 427 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 GPR85P60893 370 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 ADGRF3Q8IZF5 1079 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 BATF2Q8N1L9 274 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 CHST11Q9NPF2 352 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 ZNF346Q9UL40 294 aaKnown RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 PTAFRP25105 342 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 TRIM61Q5EBN2 209 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 OR13C5Q8NGS8 318 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 KIRREL1Q96J84 757 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 NTN4Q9HB63 628 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 ITGB4P16144 1822 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 FXYD1O00168 92 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 CCDC71Q8IV32 467 aaPredicted RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 OR1S2Q8NGQ3 325 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 MARC2Q969Z3 335 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 FER1L6-AS2Q96M78 137 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 MAGEB4O15481 346 aaPredicted RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 ACKR1Q16570 336 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 NKAIN1Q4KMZ8 207 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 BAHD1Q8TBE0 780 aaPredicted RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 OR51E1Q8TCB6 317 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 OPALINQ96PE5 141 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 GFOD1Q9NXC2 390 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 PURGQ9UJV8 347 aaKnown RBP12.74□□□□□ -0.37
PRKCB-201ENST00000303531 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
PRKCB-201ENST00000303531 SLX4Q8IY92 1834 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 TRBV5-4A0A0C4DH59 114 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 RBPJQ06330 500 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 YIPF5Q969M3 257 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 HIPK2Q9H2X6 1198 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 GPR173Q9NS66 373 aa12.73□□□□□ -0.37
PRKCB-201ENST00000303531 ANKRD61A6NGH8 418 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms