RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SLC36A2Q495M3 483 aa21.37■■□□□ 1.01
HOXC9-201ENST00000303450 CXXC5Q7LFL8 322 aaKnown RBP21.37■■□□□ 1.01
HOXC9-201ENST00000303450 ZNF555Q8NEP9 628 aa21.37■■□□□ 1.01
HOXC9-201ENST00000303450 OR51V1Q9H2C8 321 aa21.37■■□□□ 1.01
HOXC9-201ENST00000303450 MOV10Q9HCE1 1003 aaKnown RBP21.37■■□□□ 1.01
HOXC9-201ENST00000303450 EMC7Q9NPA0 242 aa21.37■■□□□ 1.01
HOXC9-201ENST00000303450 ZNF224Q9NZL3 707 aa21.37■■□□□ 1.01
HOXC9-201ENST00000303450 ZNF503-AS2A6NEH8 195 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 M0R129 80 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 MPZL1O95297 269 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 SCG5P05408 212 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 PATE4P0C8F1 98 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 GGT2P36268 569 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 ZNF83P51522 516 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 HSF2Q03933 536 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 HIST2H2BCQ6DN03 193 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 DPPA2Q7Z7J5 298 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 MDP1Q86V88 176 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 FAM81AQ8TBF8 368 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 NRG4Q8WWG1 115 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 C11orf40Q8WZ69 217 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 IL4I1Q96RQ9 567 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 RNF121Q9H920 327 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 FAM118AQ9NWS6 357 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 IMPAD1Q9NX62 359 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 B3GNT2Q9NY97 397 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 NPAP1Q9NZP6 1156 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 GMPPBQ9Y5P6 360 aa21.36■■□□□ 1.01
HOXC9-201ENST00000303450 DLGAP1O14490 977 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 CST2P09228 141 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 GAAP10253 952 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 RAB1AP62820 205 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 DAZAP2Q15038 168 aaPredicted RBP21.35■■□□□ 1.01
HOXC9-201ENST00000303450 UGT2A3Q6UWM9 527 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 SEZ6L2Q6UXD5 910 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.35■■□□□ 1.01
HOXC9-201ENST00000303450 SLC26A10Q8NG04 563 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 OR6K6Q8NGW6 343 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 TMEM163Q8TC26 289 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 ZNRF4Q8WWF5 429 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 ZNF416Q9BWM5 594 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 CCNB1IP1Q9NPC3 277 aa21.35■■□□□ 1.01
HOXC9-201ENST00000303450 NDRG4Q9ULP0 352 aaKnown RBP21.35■■□□□ 1.01
HOXC9-201ENST00000303450 LOC100130705A0A1B0GUX0 176 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 C12orf71A8MTZ7 269 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 M0R1B8 84 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 RAB36O95755 333 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 CBR1P16152 277 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 FMO3P31513 532 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 ARR3P36575 388 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 PTDSS1P48651 473 aaKnown RBP21.34■■□□□ 1.01
HOXC9-201ENST00000303450 LSM6P62312 80 aaKnown RBP21.34■■□□□ 1.01
HOXC9-201ENST00000303450 EFNB1P98172 346 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 KLHL12Q53G59 568 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 BEX5Q5H9J7 111 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 TMEM53Q6P2H8 277 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 OR10H5Q8NGA6 315 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 FGFBP3Q8TAT2 258 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 VCX3BQ9H321 246 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 MOKQ9UQ07 419 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 POLR1DQ9Y2S0 133 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 E9PQ18 207 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 PRODHO43272 600 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 TFP02787 698 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 BLVRAP53004 296 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 PCBD1P61457 104 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 TEKQ02763 1124 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 ENDOGQ14249 297 aaKnown RBP21.34■■□□□ 1.01
HOXC9-201ENST00000303450 KCNMB1Q16558 191 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 MEP1BQ16820 701 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 OTPQ5XKR4 325 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 BBS1Q8NFJ9 593 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 OR8J1Q8NGP2 316 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 FBXO17Q96EF6 278 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 PITX2Q99697 317 aa21.34■■□□□ 1.01
HOXC9-201ENST00000303450 ESRP2Q9H6T0 727 aaKnown RBP21.34■■□□□ 1.01
HOXC9-201ENST00000303450 HECTD1Q9ULT8 2610 aa21.33■■□□□ 1.01
HOXC9-201ENST00000303450 A6NNC1 897 aa21.33■■□□□ 1
HOXC9-201ENST00000303450 SLC16A6O15403 523 aa21.33■■□□□ 1
HOXC9-201ENST00000303450 GLCEO94923 617 aa21.33■■□□□ 1
HOXC9-201ENST00000303450 RPS7P62081 194 aaKnown RBP21.33■■□□□ 1
HOXC9-201ENST00000303450 TMEM108Q6UXF1 575 aa21.33■■□□□ 1
HOXC9-201ENST00000303450 FAM169BQ8N8A8 192 aa21.33■■□□□ 1
HOXC9-201ENST00000303450 TRUB1Q8WWH5 349 aaKnown RBP21.33■■□□□ 1
HOXC9-201ENST00000303450 CYGBQ8WWM9 190 aa21.33■■□□□ 1
HOXC9-201ENST00000303450 MARVELD3Q96A59 401 aa21.33■■□□□ 1
HOXC9-201ENST00000303450 PLPPR2Q96GM1 343 aa21.33■■□□□ 1
HOXC9-201ENST00000303450 NOX3Q9HBY0 568 aa21.33■■□□□ 1
HOXC9-201ENST00000303450 H2AFY2Q9P0M6 372 aaPredicted RBP21.33■■□□□ 1
HOXC9-201ENST00000303450 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.32■■□□□ 1
HOXC9-201ENST00000303450 TVP23AA6NH52 213 aa21.32■■□□□ 1
HOXC9-201ENST00000303450 DEFB108AA8MXU0 73 aa21.32■■□□□ 1
HOXC9-201ENST00000303450 IGKV3-15P01624 115 aa21.32■■□□□ 1
HOXC9-201ENST00000303450 HRGP04196 525 aa21.32■■□□□ 1
HOXC9-201ENST00000303450 MMP7P09237 267 aaPredicted RBP21.32■■□□□ 1
HOXC9-201ENST00000303450 ZNF823P16415 610 aa21.32■■□□□ 1
HOXC9-201ENST00000303450 ZNF32P17041 273 aa21.32■■□□□ 1
HOXC9-201ENST00000303450 IDH3GP51553 393 aaPredicted RBP21.32■■□□□ 1
HOXC9-201ENST00000303450 LINC01590Q5TEZ4 76 aa21.32■■□□□ 1
HOXC9-201ENST00000303450 FBXW10Q5XX13 1052 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms