RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ANKRD10Q9NXR5 420 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 DKKL1Q9UK85 242 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 LRP12Q9Y561 859 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 ETV7Q9Y603 341 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 R4GN57 208 aa17.34■□□□□ 0.37
HOXC4-201ENST00000303406 LYRM1O43325 122 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 DNPH1O43598 174 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 ZIC3O60481 467 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 VAMP5O95183 116 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 TRAPPC2P0DI81 140 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 TRAPPC2BP0DI82 140 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 LAP3P28838 519 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 MMP15P51511 669 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 RPS18P62269 152 aaKnown RBP17.33■□□□□ 0.37
HOXC4-201ENST00000303406 H3F3AP84243 136 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 C19orf57Q0VDD7 668 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 Q0VFX4 171 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 POU4F3Q15319 338 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 JMJD6Q6NYC1 403 aaPredicted RBP17.33■□□□□ 0.37
HOXC4-201ENST00000303406 SPATC1Q76KD6 591 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 AKAP14Q86UN6 197 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 OR10H5Q8NGA6 315 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 ENKURQ8TC29 256 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 LGALS14Q8TCE9 139 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 TRIM63Q969Q1 353 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 FOXN4Q96NZ1 517 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 SLC25A18Q9H1K4 315 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 SSUH2Q9Y2M2 353 aa17.33■□□□□ 0.37
HOXC4-201ENST00000303406 IGKV1D-43A0A0B4J1Z2 117 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 A0A1B0GTH9 108 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 GJE1A6NN92 205 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 TERTO14746 1132 aaKnown RBP17.32■□□□□ 0.36
HOXC4-201ENST00000303406 GALR2O43603 387 aaPredicted RBP17.32■□□□□ 0.36
HOXC4-201ENST00000303406 GSTZ1O43708 216 aaPredicted RBP17.32■□□□□ 0.36
HOXC4-201ENST00000303406 P04436 131 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 ZNF43P17038 809 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 SRD5A2P31213 254 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 CLRN1P58418 232 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 FOXK1P85037 733 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 KCNMB1Q16558 191 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 HIST3H3Q16695 136 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 TMEM225Q6GV28 225 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 SLC25A47Q6Q0C1 308 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 RNF133Q8WVZ7 376 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 C11orf40Q8WZ69 217 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 HPS1Q92902 700 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 RELTQ969Z4 430 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 PIGQQ9BRB3 760 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 NAA11Q9BSU3 229 aaPredicted RBP17.32■□□□□ 0.36
HOXC4-201ENST00000303406 THAP7Q9BT49 309 aaPredicted RBP17.32■□□□□ 0.36
HOXC4-201ENST00000303406 EDEM2Q9BV94 578 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 TMEM185BQ9H7F4 350 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 P4HTMQ9NXG6 502 aa17.32■□□□□ 0.36
HOXC4-201ENST00000303406 MRPS18CQ9Y3D5 142 aaKnown RBP17.32■□□□□ 0.36
HOXC4-201ENST00000303406 A0A087WV48 116 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 OR2M5A3KFT3 312 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 TLX3O43711 291 aaPredicted RBP17.31■□□□□ 0.36
HOXC4-201ENST00000303406 MPZL1O95297 269 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 PNPP00491 289 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 ISG15P05161 165 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 FAM157BP0CG42 384 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 SFTPDP35247 375 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 MNDAP41218 407 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 KIR2DL3P43628 341 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 NUBP1P53384 320 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 RAC1P63000 192 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 CSNK2A1P68400 391 aaPredicted RBP17.31■□□□□ 0.36
HOXC4-201ENST00000303406 RHOUQ7L0Q8 258 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 DCXRQ7Z4W1 244 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 RAB40AQ8WXH6 277 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 TMEM106AQ96A25 262 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 ABCG5Q9H222 651 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 CYB5R1Q9UHQ9 305 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 FOXJ3Q9UPW0 622 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 ADRA2CP18825 462 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 FSTP19883 344 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 ACHEP22303 614 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 MAGEB1P43366 347 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 SOX2P48431 317 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 ZNF468Q5VIY5 522 aaPredicted RBP17.31■□□□□ 0.36
HOXC4-201ENST00000303406 RAET1LQ5VY80 246 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 OR7E24Q6IFN5 339 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 ZNF704Q6ZNC4 412 aaPredicted RBP17.31■□□□□ 0.36
HOXC4-201ENST00000303406 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.31■□□□□ 0.36
HOXC4-201ENST00000303406 ZNF433Q8N7K0 673 aaPredicted RBP17.31■□□□□ 0.36
HOXC4-201ENST00000303406 KCNE4Q8WWG9 221 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 GNRHR2Q96P88 292 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 ABHD1Q96SE0 405 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 EMC6Q9BV81 110 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 HDHD2Q9H0R4 259 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 RNF121Q9H920 327 aa17.31■□□□□ 0.36
HOXC4-201ENST00000303406 LINC00854A0A1B0GVQ3 168 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 PMS2P1A4D2B8 440 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 ZNF726A6NNF4 738 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 ZNF814B7Z6K7 855 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 SULT1B1O43704 296 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 TCEA1P23193 301 aaKnown RBP17.3■□□□□ 0.36
HOXC4-201ENST00000303406 MMP16P51512 607 aa17.3■□□□□ 0.36
HOXC4-201ENST00000303406 ZNF133P52736 654 aaPredicted RBP17.3■□□□□ 0.36
HOXC4-201ENST00000303406 MFGE8Q08431 387 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms