RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CACNA1IQ9P0X4 2223 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 TEX13DA0A0J9YY54 714 aaPredicted RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 ELOA3DA6NLF2 546 aaPredicted RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 EFCAB7A8K855 629 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 ZNF736B4DX44 427 aaPredicted RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 PRRT4C9JH25 899 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 P2RX6O15547 441 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 MOSPD3O75425 235 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 GPANK1O95872 356 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CYB5AP00167 134 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CISD3P0C7P0 127 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CEBPBP17676 345 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CCKBRP32239 447 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 PBX2P40425 430 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 RPS4XP62701 263 aaKnown RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 TGIF1Q15583 401 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 ELOA3BQ3SY89 546 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 TMEM52BQ4KMG9 183 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CNKSR3Q6P9H4 555 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CORO6Q6QEF8 472 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CD163Q86VB7 1156 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 TMEM200AQ86VY9 491 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CDC20BQ86Y33 519 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CACUL1Q86Y37 369 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 ELOA3Q8NG57 546 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 TSEN15Q8WW01 171 aaKnown RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 HIST1H2BAQ96A08 127 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 FOXRED1Q96CU9 486 aaPredicted RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 C14orf79Q96F83 325 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CLCC1Q96S66 551 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 STACQ99469 402 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 TRIM2Q9C040 744 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 EGLN1Q9GZT9 426 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 LAT2Q9GZY6 243 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 HRH4Q9H3N8 390 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 RHOFQ9HBH0 211 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 MKKSQ9NPJ1 570 aaPredicted RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 FBXL21Q9UKT6 434 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 PCDHGA1Q9Y5H4 931 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 A0A1W2PPC1 479 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 C9orf170A2RU37 121 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 PMS2P1A4D2B8 440 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 C9JQL5 133 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 FGF17O60258 216 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CRHP06850 196 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CD14P08571 375 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 APEHP13798 732 aaKnown RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 AIMP2Q13155 320 aaKnown RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 SMCO1Q147U7 214 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 WDR38Q5JTN6 314 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 IL34Q6ZMJ4 242 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 SLC25A42Q86VD7 318 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 ZSCAN4Q8NAM6 433 aaPredicted RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 CASTOR1Q8WTX7 329 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 MITD1Q8WV92 249 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 DCUN1D4Q92564 292 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 C4orf45Q96LM5 186 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 COMMD4Q9H0A8 199 aa9.83□□□□□ -0.84
ZNF558-201ENST00000301475 RPH3AQ9Y2J0 694 aaPredicted RBP9.83□□□□□ -0.84
ZNF558-201ENST00000301475 TMEM235A6NFC5 223 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 IGLON5A6NGN9 336 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 MSGN1A6NI15 193 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 TMEM212A6NML5 194 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 IL2RAP01589 272 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 IGKV1D-16P01601 117 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 SFTA3P0C7M3 94 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 HGFACQ04756 655 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 FABP9Q0Z7S8 132 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 ELOCQ15369 112 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 AKIRIN2Q53H80 203 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 ACER2Q5QJU3 275 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 OR10K2Q6IF99 312 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 ULK3Q6PHR2 472 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 DPY19L4Q7Z388 723 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 BHLHE23Q8NDY6 225 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 OR4E2Q8NGC2 313 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 OR4N2Q8NGD1 307 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 OR8D1Q8WZ84 308 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 ZNF775Q96BV0 537 aaPredicted RBP9.82□□□□□ -0.84
ZNF558-201ENST00000301475 SLC41A2Q96JW4 573 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 TOX2Q96NM4 488 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 WDR76Q9H967 626 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 SRA1Q9HD15 236 aaKnown RBP9.82□□□□□ -0.84
ZNF558-201ENST00000301475 CHMP1AQ9HD42 196 aaPredicted RBP9.82□□□□□ -0.84
ZNF558-201ENST00000301475 MBNL1Q9NR56 388 aaKnown RBP9.82□□□□□ -0.84
ZNF558-201ENST00000301475 LPAR3Q9UBY5 353 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 DAPP1Q9UN19 280 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 INSL6Q9Y581 213 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 GRXCR1A8MXD5 290 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 C1orf196B1AJZ1 125 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 H0YIZ8 118 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 DOK2O60496 412 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 LILRB3O75022 631 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 P2RY2P41231 377 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 PPICP45877 212 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 SKP1P63208 163 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 PAPD4Q6PIY7 484 aaKnown RBP9.82□□□□□ -0.84
ZNF558-201ENST00000301475 KCTD9Q7L273 389 aa9.82□□□□□ -0.84
ZNF558-201ENST00000301475 SAMD14Q8IZD0 417 aaPredicted RBP9.82□□□□□ -0.84
ZNF558-201ENST00000301475 OR6N2Q8NGY6 317 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms