RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ZNF829Q3KNS6 432 aaPredicted RBP13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 SLC25A47Q6Q0C1 308 aa13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 KRT77Q7Z794 578 aa13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 OR6N1Q8NGY5 312 aa13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 ZNF385AQ96PM9 386 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 OR2M2Q96R28 347 aa13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 ABHD6Q9BV23 337 aa13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 WDR12Q9GZL7 423 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 SLC6A15Q9H2J7 730 aa13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 PAQR5Q9NXK6 330 aaPredicted RBP13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 PEX16Q9Y5Y5 336 aa13.97□□□□□ -0.17
HERPUD1-201ENST00000300302 CLDN25C9JDP6 229 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 CEACAM4O75871 244 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 ACTL6AO96019 429 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 ZNF708P17019 499 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 GUCA1AP43080 201 aaPredicted RBP13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 ALKBH1Q13686 389 aaKnown RBP13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 INSL4Q14641 139 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 BCL2A1Q16548 175 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 ACSM3Q53FZ2 586 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 OTPQ5XKR4 325 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 ABLIM2Q6H8Q1 611 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 ZNF544Q6NX49 715 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 CEACAM19Q7Z692 300 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 OR52N5Q8NH56 324 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 RPS4Y2Q8TD47 263 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 C11orf40Q8WZ69 217 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 ABTB1Q969K4 478 aaPredicted RBP13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 SEC61A2Q9H9S3 476 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 SLCO1C1Q9NYB5 712 aa13.96□□□□□ -0.17
HERPUD1-201ENST00000300302 A0A075B6Q4 140 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 TRAV17A0A0B4J275 112 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 SC5DO75845 299 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 GATBO75879 557 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 MTNR1BP49286 362 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 CLDN18P56856 261 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF846Q147U1 533 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 YIF1BQ5BJH7 314 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 LRRN1Q6UXK5 716 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 LRRC69Q6ZNQ3 347 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 ROBO4Q8WZ75 1007 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 BORCS5Q969J3 196 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 TMEM54Q969K7 222 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 AMELYQ99218 206 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 ELOVL3Q9HB03 270 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 RCE1Q9Y256 329 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF281Q9Y2X9 895 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF716A6NP11 495 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 CYTIPO60759 359 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF254O75437 659 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 MYL9P24844 172 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 CALRP27797 417 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 RIDAP52758 137 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 NANOS3P60323 173 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 SRYQ05066 204 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 RASGEF1BQ0VAM2 473 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 HNRNPA0Q13151 305 aaKnown RBP13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 LRFN4Q6PJG9 635 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 TRILQ7L0X0 811 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 FCRLAQ7L513 359 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 DCXRQ7Z4W1 244 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 TMEM123Q8N131 208 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 ZIC4Q8N9L1 334 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 OR5AK2Q8NH90 309 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 AP3S1Q92572 193 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 KCNS3Q9BQ31 491 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 PDCD1LG2Q9BQ51 273 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 BARHL1Q9BZE3 327 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 LDAHQ9H6V9 325 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 POLR1DQ9Y2S0 133 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 FLVCR1Q9Y5Y0 555 aa13.95□□□□□ -0.18
HERPUD1-201ENST00000300302 CELSR3Q9NYQ7 3312 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 IQCMA0A1B0GVH7 501 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 EFSO43281 561 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 ARL6IP5O75915 188 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF432O94892 652 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 ZFPL1O95159 310 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 SYNGR4O95473 234 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 ZMAT1Q5H9K5 638 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 C10orf128Q5T292 105 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 FDX2Q6P4F2 183 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 DEGS2Q6QHC5 323 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 CROCCP3Q8IVE0 287 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 TEX19Q8NA77 164 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 SNIP1Q8TAD8 396 aaKnown RBP13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 RNF128Q8TEB7 428 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 PHYHIPQ92561 330 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 RNF166Q96A37 237 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF845Q96IR2 970 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 SMAD5Q99717 465 aaKnown RBP13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 COMMD4Q9H0A8 199 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 EXO5Q9H790 373 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 AKIP1Q9NQ31 210 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 FRRS1LQ9P0K9 344 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 CYB5R1Q9UHQ9 305 aa13.94□□□□□ -0.18
HERPUD1-201ENST00000300302 TMEM212A6NML5 194 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 SLC43A1O75387 559 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 CLEC2LP0C7M8 214 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 SELENOPP49908 381 aa13.93□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF133P52736 654 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms