RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PITX1P78337 314 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 DLX2Q07687 328 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 NLGN4YQ8NFZ3 816 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 MR1Q95460 341 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 SMG9Q9H0W8 520 aaKnown RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 TGM1P22735 817 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 HTR1FP30939 366 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 TMEM201Q5SNT2 666 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 UNC5DQ6UXZ4 953 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 OR2AK2Q8NG84 335 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 EVA1AQ9H8M9 152 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 HELTA6NFD8 242 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 OR2J3O76001 311 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 OPN1LWP04000 364 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 ARG1P05089 322 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF30P17039 623 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 IL2RGP31785 369 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 FAM162BQ5T6X4 162 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 MFSD4AQ8N468 514 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 LHFPL5Q8TAF8 219 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 RTP3Q9BQQ7 232 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 NMES1Q9C002 83 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 RAB22AQ9UL26 194 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 UBE2L5PA0A1B0GUS4 154 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 B4E171 279 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 OR7C1O76099 320 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 TP53INP2Q8IXH6 220 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 OR52R1Q8NGF1 315 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 UBL7Q96S82 380 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 NECAP2Q9NVZ3 263 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 AKR7A3O95154 331 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 STAG3L2P0CL84 134 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 CPEP16870 476 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 BMP5P22003 454 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 DHRS4L2Q6PKH6 230 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 PHYHIPQ92561 330 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 B4GALT6Q9UBX8 382 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 TRAPPC2LH3BP13 241 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 CHRM4P08173 479 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 COL19A1Q14993 1142 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 CMTM4Q8IZR5 234 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 PPP1R1CQ8WVI7 109 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 TP53RKQ96S44 253 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 OR52A1Q9UKL2 312 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 RGS13O14921 159 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 MBTPS2O43462 519 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 SOCS5O75159 536 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF765Q7L2R6 523 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 EID2Q8N6I1 236 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 SH3RF2Q8TEC5 729 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 STACQ99469 402 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 ANKRD36CQ5JPF3 1778 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 MCHR2Q969V1 340 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 NAT8BQ9UHF3 227 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 CNN3Q15417 329 aaKnown RBP10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 AWAT1Q58HT5 328 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 MANEAQ5SRI9 462 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 OSTM1Q86WC4 334 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 LRRC18Q8N456 261 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 OR5B2Q96R09 309 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 OR6C3Q9NZP0 311 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 A0A1B0GTQ1 180 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 P2RY10O00398 339 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 Q499Y3 187 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 ANKRD34AQ69YU3 496 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 MISPQ8IVT2 679 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF485Q8NCK3 441 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 EDDM13A0A1B0GTR0 161 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 ZCWPW2A0A1B0GU75 182 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 SELENOFO60613 162 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 CRYBA1P05813 215 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 PI3P19957 117 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 PDE7AQ13946 482 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 EXOSC7Q15024 291 aaKnown RBP10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 MPPED2Q15777 294 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 WDR73Q6P4I2 378 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 WNT10BO00744 389 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 ADRA2CP18825 462 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 COX20Q5RI15 118 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 MANEALQ5VSG8 457 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 FKBP11Q9NYL4 201 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 ACOT8O14734 319 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 OR4E1P0C645 316 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 EPXP11678 715 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 HRH1P35367 487 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 SOX18P35713 384 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 ASCL1P50553 236 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 PRICKLE2Q7Z3G6 844 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 HDAC8Q9BY41 377 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 TRAPPC4Q9Y296 219 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 NACAE9PAV3 2078 aa10.84□□□□□ -0.67
SHROOM3-201ENST00000296043 DPPA3Q6W0C5 159 aa10.83□□□□□ -0.67
SHROOM3-201ENST00000296043 PRR22Q8IZ63 422 aa10.83□□□□□ -0.67
SHROOM3-201ENST00000296043 UBTD1Q9HAC8 227 aa10.83□□□□□ -0.67
SHROOM3-201ENST00000296043 GPR55Q9Y2T6 319 aaPredicted RBP10.83□□□□□ -0.67
SHROOM3-201ENST00000296043 PIK3C2BO00750 1634 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 HSBP1O75506 76 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 YIF1AO95070 293 aa10.83□□□□□ -0.68
SHROOM3-201ENST00000296043 ZP2Q05996 745 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms