RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 HSD17B8Q92506 261 aa20.29■□□□□ 0.84
PTX3-201ENST00000295927 TMEM54Q969K7 222 aa20.29■□□□□ 0.84
PTX3-201ENST00000295927 KCNN2Q9H2S1 579 aa20.29■□□□□ 0.84
PTX3-201ENST00000295927 GLTPQ9NZD2 209 aa20.29■□□□□ 0.84
PTX3-201ENST00000295927 ZNF407Q9C0G0 2248 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 ACOT7O00154 380 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 ZNF432O94892 652 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 ZNF708P17019 499 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 CSNK1A1P48729 337 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 RORCP51449 518 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 MRPL28Q13084 256 aaKnown RBP20.28■□□□□ 0.84
PTX3-201ENST00000295927 DYNC1I2Q13409 638 aaKnown RBP20.28■□□□□ 0.84
PTX3-201ENST00000295927 HAVCR2Q8TDQ0 301 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 ABTB1Q969K4 478 aaPredicted RBP20.28■□□□□ 0.84
PTX3-201ENST00000295927 ZNF775Q96BV0 537 aaPredicted RBP20.28■□□□□ 0.84
PTX3-201ENST00000295927 PDCD1LG2Q9BQ51 273 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 ELOVL3Q9HB03 270 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 LIPGQ9Y5X9 500 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 FLVCR1Q9Y5Y0 555 aa20.28■□□□□ 0.84
PTX3-201ENST00000295927 SC5DO75845 299 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 AQP8O94778 261 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 SELENOPP49908 381 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 ROM1Q03395 351 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 KCTD18Q6PI47 426 aaPredicted RBP20.27■□□□□ 0.84
PTX3-201ENST00000295927 LINC00346Q8IVM7 164 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 ZNF679Q8IYX0 411 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 OR10H5Q8NGA6 315 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 OR6N1Q8NGY5 312 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 SLC25A46Q96AG3 418 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 C6orf62Q9GZU0 229 aaPredicted RBP20.27■□□□□ 0.84
PTX3-201ENST00000295927 DEFB127Q9H1M4 99 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 SEC61A2Q9H9S3 476 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 SHISA3A0PJX4 238 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 WNT11O96014 354 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 NR2C1P13056 603 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 SDHBP21912 280 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 CDAP32320 146 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 ACSM3Q53FZ2 586 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 PHYHD1Q5SRE7 291 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 SPATC1Q76KD6 591 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 FCRLAQ7L513 359 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 DCXRQ7Z4W1 244 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 CEACAM19Q7Z692 300 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 MEIOBQ8N635 442 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 OR52N5Q8NH56 324 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 PHF3Q92576 2039 aaKnown RBP20.27■□□□□ 0.84
PTX3-201ENST00000295927 MROQ9BYG7 248 aa20.27■□□□□ 0.84
PTX3-201ENST00000295927 PPIL3Q9H2H8 161 aaKnown RBP20.27■□□□□ 0.84
PTX3-201ENST00000295927 DNAJC13O75165 2243 aa20.26■□□□□ 0.83
PTX3-201ENST00000295927 HSPB2A8KAH6 182 aa20.26■□□□□ 0.83
PTX3-201ENST00000295927 CYTIPO60759 359 aa20.26■□□□□ 0.83
PTX3-201ENST00000295927 RPS11P62280 158 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTX3-201ENST00000295927 PMP22Q01453 160 aa20.26■□□□□ 0.83
PTX3-201ENST00000295927 ALKBH1Q13686 389 aaKnown RBP20.26■□□□□ 0.83
PTX3-201ENST00000295927 HSPB2Q16082 182 aa20.26■□□□□ 0.83
PTX3-201ENST00000295927 KRT77Q7Z794 578 aa20.26■□□□□ 0.83
PTX3-201ENST00000295927 ST7LQ8TDW4 575 aa20.26■□□□□ 0.83
PTX3-201ENST00000295927 SMAD5Q99717 465 aaKnown RBP20.26■□□□□ 0.83
PTX3-201ENST00000295927 FRRS1LQ9P0K9 344 aa20.26■□□□□ 0.83
PTX3-201ENST00000295927 SPTBN2O15020 2390 aa20.26■□□□□ 0.83
PTX3-201ENST00000295927 CASKO14936 926 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 GPRIN2O60269 458 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 TMCC2O75069 709 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 SERPINA3P01011 423 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 HNRNPA0Q13151 305 aaKnown RBP20.25■□□□□ 0.83
PTX3-201ENST00000295927 BCL2A1Q16548 175 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 FAM27D1Q5T7N8 215 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 CORO6Q6QEF8 472 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 PNPLA2Q96AD5 504 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 MAP6Q96JE9 813 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 KCNS3Q9BQ31 491 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 ZDHHC11Q9H8X9 412 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 FOXD3Q9UJU5 478 aaPredicted RBP20.25■□□□□ 0.83
PTX3-201ENST00000295927 WASF3Q9UPY6 502 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 TNRC6AQ8NDV7 1962 aaKnown RBP20.25■□□□□ 0.83
PTX3-201ENST00000295927 LOC400499M0QZD8 3231 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 TRAV17A0A0B4J275 112 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 A0A1B0GTH9 108 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 SMIM30A4D0T7 59 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 ZFPL1O95159 310 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 ACTL6AO96019 429 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 CALRP27797 417 aaKnown RBP20.25■□□□□ 0.83
PTX3-201ENST00000295927 ZNF133P52736 654 aaPredicted RBP20.25■□□□□ 0.83
PTX3-201ENST00000295927 RASGEF1BQ0VAM2 473 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 LDAHQ9H6V9 325 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 EMC7Q9NPA0 242 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 AKIP1Q9NQ31 210 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 CYB5R1Q9UHQ9 305 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 UGT2A1Q9Y4X1 527 aa20.25■□□□□ 0.83
PTX3-201ENST00000295927 DCHS1Q96JQ0 3298 aa20.24■□□□□ 0.83
PTX3-201ENST00000295927 A0A087WV48 116 aa20.24■□□□□ 0.83
PTX3-201ENST00000295927 NTF4P34130 210 aa20.24■□□□□ 0.83
PTX3-201ENST00000295927 C10orf128Q5T292 105 aa20.24■□□□□ 0.83
PTX3-201ENST00000295927 C20orf196Q8IYI0 205 aa20.24■□□□□ 0.83
PTX3-201ENST00000295927 OR2G2Q8NGZ5 317 aa20.24■□□□□ 0.83
PTX3-201ENST00000295927 RNF128Q8TEB7 428 aa20.24■□□□□ 0.83
PTX3-201ENST00000295927 ABHD3Q8WU67 409 aa20.24■□□□□ 0.83
PTX3-201ENST00000295927 INTS12Q96CB8 462 aaKnown RBP20.24■□□□□ 0.83
PTX3-201ENST00000295927 RCE1Q9Y256 329 aa20.24■□□□□ 0.83
PTX3-201ENST00000295927 ZNF281Q9Y2X9 895 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms