RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 KIR2DL3P43628 341 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 CAMK2BQ13554 666 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 ARSGQ96EG1 525 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF355PQ9NSJ1 428 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 MED29Q9NX70 200 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 MTCH2Q9Y6C9 303 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 M0R135 149 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF799Q96GE5 643 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 PDCD1LG2Q9BQ51 273 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 HINT3Q9NQE9 182 aaKnown RBP16.9■□□□□ 0.3
PCDH1-201ENST00000287008 GLTPQ9NZD2 209 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 HOXC4P09017 264 aaPredicted RBP16.89■□□□□ 0.3
PCDH1-201ENST00000287008 HIST1H1CP16403 213 aaKnown RBP16.89■□□□□ 0.3
PCDH1-201ENST00000287008 S100A7P31151 101 aa16.89■□□□□ 0.3
PCDH1-201ENST00000287008 ADPRMQ3LIE5 342 aa16.89■□□□□ 0.3
PCDH1-201ENST00000287008 GLIPR1L1Q6UWM5 242 aa16.89■□□□□ 0.3
PCDH1-201ENST00000287008 PLPP7Q8NBV4 271 aa16.89■□□□□ 0.3
PCDH1-201ENST00000287008 SCCPDHQ8NBX0 429 aa16.89■□□□□ 0.3
PCDH1-201ENST00000287008 SLAMF6Q96DU3 332 aa16.89■□□□□ 0.3
PCDH1-201ENST00000287008 UFSP2Q9NUQ7 469 aa16.89■□□□□ 0.3
PCDH1-201ENST00000287008 RAB22AQ9UL26 194 aa16.89■□□□□ 0.3
PCDH1-201ENST00000287008 POLDIP2Q9Y2S7 368 aa16.89■□□□□ 0.3
PCDH1-201ENST00000287008 IFNA10P01566 189 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 CHRM2P08172 466 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 ELP2Q6IA86 826 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 TMEM82A0PJX8 343 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 RBP2P50120 134 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 SPCS2Q15005 226 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 DESI1Q6ICB0 168 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 FAM199XQ6PEV8 388 aaPredicted RBP16.89■□□□□ 0.29
PCDH1-201ENST00000287008 IDO2Q6ZQW0 420 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 OR2I1PQ8NGU4 316 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 LRFN5Q96NI6 719 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 NUDT9Q9BW91 350 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 IGHV5-51A0A0C4DH38 117 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 TNFSF14O43557 240 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 UBL3O95164 117 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 RBMS2Q15434 407 aaKnown RBP16.89■□□□□ 0.29
PCDH1-201ENST00000287008 CARFQ8N187 725 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 SMRP1Q8NCR6 262 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 SMOC1Q9H4F8 434 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 BCO1Q9HAY6 547 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 ETV7Q9Y603 341 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 CEPT1Q9Y6K0 416 aa16.89■□□□□ 0.29
PCDH1-201ENST00000287008 A0A096LPE4 126 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 A0A1W2PPZ6 126 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 PCP4L1A6NKN8 68 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 SPI1P17947 270 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 NFYBP25208 207 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 SNRPD2P62316 118 aaKnown RBP16.88■□□□□ 0.29
PCDH1-201ENST00000287008 OR2V1Q8NHB1 315 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 TSSK2Q96PF2 358 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 SLCO5A1Q9H2Y9 848 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 TRDV1A0A1B0GX56 115 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 E9PI62 339 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 NFYAP23511 347 aaPredicted RBP16.88■□□□□ 0.29
PCDH1-201ENST00000287008 PTAFRP25105 342 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 LAP3P28838 519 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 MRPL19P49406 292 aaKnown RBP16.88■□□□□ 0.29
PCDH1-201ENST00000287008 HES1Q14469 280 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 ZNF628Q5EBL2 1059 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 WDR88Q6ZMY6 472 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 ADGRE4PQ86SQ3 457 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 ZNF679Q8IYX0 411 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 FAM26EQ8N5C1 309 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 KIRREL1Q96J84 757 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 PRDM7Q9NQW5 492 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 DOCK1Q14185 1865 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 ZNF318Q5VUA4 2279 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 A0A0A6YYD5 115 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 SPDEFO95238 335 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 PAPLNO95428 1278 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 GDNFP39905 211 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 AGFG1P52594 562 aaKnown RBP16.88■□□□□ 0.29
PCDH1-201ENST00000287008 TMEM185AQ8NFB2 350 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 TXNIPQ9H3M7 391 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 CLEC1BQ9P126 229 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 DEGS1O15121 323 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 OR1C1Q15619 314 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 OR4D6Q8NGJ1 314 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 OR56B4Q8NH76 319 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 FAM173AQ9BQD7 235 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 VN1R1Q9GZP7 353 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 MOB1AQ9H8S9 216 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 TNFRSF12AQ9NP84 129 aa16.88■□□□□ 0.29
PCDH1-201ENST00000287008 EXO1Q9UQ84 846 aaKnown RBP16.88■□□□□ 0.29
PCDH1-201ENST00000287008 EP300Q09472 2414 aaPredicted RBP16.87■□□□□ 0.29
PCDH1-201ENST00000287008 LINC01387J3KSC0 135 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 DHHO43323 396 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 KITLGP21583 273 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 DIO1P49895 249 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 ZNF133P52736 654 aaPredicted RBP16.87■□□□□ 0.29
PCDH1-201ENST00000287008 PARP16Q8N5Y8 322 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 TRGV5A0A0B4J1U4 118 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 CCDC163A0A0D9SF12 145 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 TFAP2AP05549 437 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 FOLR1P15328 257 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 NAGAP17050 411 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 PSMB1P20618 241 aaKnown RBP16.87■□□□□ 0.29
PCDH1-201ENST00000287008 PTPN6P29350 595 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms