RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 COL16A1Q07092 1604 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 CHEK1O14757 476 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 UPK1BO75841 260 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SCO1O75880 301 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 CALCBP10092 127 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OMGP23515 440 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 RPL27P61353 136 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MAP4K2Q12851 820 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SLC10A2Q12908 348 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 GPR19Q15760 415 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MEP1BQ16820 701 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF789Q5FWF6 425 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 FAM26DQ5JW98 314 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MARCH8Q5T0T0 291 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MDGA2Q7Z553 956 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 C17orf78Q8N4C9 275 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OR51F2Q8NH61 342 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SLC38A5Q8WUX1 472 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF395Q9H8N7 513 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ACKR4Q9NPB9 350 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 LANCL2Q9NS86 450 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ASIC5Q9NY37 505 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 RPH3ALQ9UNE2 315 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MYH15Q9Y2K3 1946 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TMEM200CA6NKL6 621 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 OR7A17O14581 309 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 PRICKLE3O43900 615 aaPredicted RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 RFPL3O75679 317 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 PSMB10P40306 273 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 FOXK2Q01167 660 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 CDK5R2Q13319 367 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 RNPS1Q15287 305 aaKnown RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 SLC9A3R2Q15599 337 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ARHGAP11BQ3KRB8 267 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 GLIPR1L1Q6UWM5 242 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 CD163Q86VB7 1156 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 OR51A4Q8NGJ6 313 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 NEIL1Q96FI4 390 aaPredicted RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 NUDT16L1Q9BRJ7 211 aaKnown RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 CRLF2Q9HC73 371 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 RCE1Q9Y256 329 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 NALCNQ8IZF0 1738 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 LOC107986453A0A1B0GWG9 222 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ARHGAP33O14559 1287 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 TAAR5O14804 337 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 TUSC2O75896 110 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 PPP3CBP16298 524 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 MAOBP27338 520 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ARRB2P32121 409 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 EMP3P54852 163 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 IHHQ14623 411 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 BATFQ16520 125 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 GTDC1Q4AE62 458 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 AGBL4Q5VU57 503 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF425Q6IV72 752 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 TMEM207Q6UWW9 146 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 FAM122BQ7Z309 247 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 CDH26Q8IXH8 852 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 KCNRGQ8N5I3 272 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 TAAR9Q96RI9 348 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ELF4Q99607 663 aaPredicted RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 SOX7Q9BT81 388 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 PGAP2Q9UHJ9 254 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 MEIS3P2A8K0S8 358 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF705GA8MUZ8 300 aaPredicted RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 G3V3Y1 287 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 M0R135 149 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ADAM10O14672 748 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 PHF1O43189 567 aaPredicted RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 SCGB1D1O95968 90 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 THBS1P07996 1170 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 FOLR1P15328 257 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 COX5AP20674 150 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 PSMB5P28074 263 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 PIGAP37287 484 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 RPS10P46783 165 aaKnown RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ADPRHP54922 357 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 FAM53BQ14153 422 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 PLA1AQ53H76 456 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 JMJD6Q6NYC1 403 aaPredicted RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 GFRALQ6UXV0 394 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 KDM8Q8N371 416 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 TMIGD2Q96BF3 282 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF799Q96GE5 643 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 SLC39A13Q96H72 371 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ATOH8Q96SQ7 321 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ARPC5LQ9BPX5 153 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 INPP5KQ9BT40 448 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 SMIM3Q9BZL3 60 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 TMEM165Q9HC07 324 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 GAR1Q9NY12 217 aaKnown RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 NKX1-2Q9UD57 310 aaPredicted RBP3.73□□□□□ -1.81
SCN3A-201ENST00000283254 ATP23Q9Y6H3 246 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 CCDC88CQ9P219 2028 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 SHPRHQ149N8 1683 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 A0A0B4J203 849 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 FAM183AA6NL82 134 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 LMO7DNF2Z398 122 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 HOXB5P09067 269 aa3.73□□□□□ -1.81
SCN3A-201ENST00000283254 APEX1P27695 318 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms