RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 IFI44Q8TCB0 444 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TIMM29Q9BSF4 260 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 COX7A2P2O60397 106 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 OR5G3P0C626 314 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 HOXC5Q00444 222 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 GUK1Q16774 197 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF787Q6DD87 383 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 NTMT1Q9BV86 223 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 DOCK10Q96BY6 2186 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 PMS2P1A4D2B8 440 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 SH2D1BO14796 132 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 CYC1P08574 325 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 EN2P19622 333 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ARNTP27540 789 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 RAD52P43351 418 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TNFRSF4P43489 277 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 RNF212Q495C1 297 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 PXDC1Q5TGL8 231 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 COMMD5Q9GZQ3 224 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 CSAG2Q9Y5P2 127 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 I6L893 689 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-201ENST00000282516 AIFM1O95831 613 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 CD70P32970 193 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 ADPRMQ3LIE5 342 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 KDM4DQ6B0I6 523 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 OR5M10Q6IEU7 315 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 ISG20Q96AZ6 181 aaKnown RBP8.05□□□□□ -1.12
NIPBL-201ENST00000282516 SLC35A4Q96G79 324 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF583Q96ND8 569 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 ARHGDIGQ99819 225 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 GVINP1Q7Z2Y8 2422 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 LAMA4Q16363 1823 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 PAPLNO95428 1278 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 CCR6P51684 374 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 IER5LQ5T953 404 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF468Q5VIY5 522 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-201ENST00000282516 GLIPR1L1Q6UWM5 242 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 CLEC9AQ6UXN8 241 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 SEH1LQ96EE3 360 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 CPPED1Q9BRF8 314 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-201ENST00000282516 A0A0B4J203 849 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 PRSS38A1L453 326 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 RFPL4AA6NLU0 287 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 RFPL4AL1F8VTS6 287 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 SRMP19623 302 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 COX5AP20674 150 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 HTR1FP30939 366 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 INHBCP55103 352 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 TNFRSF17Q02223 184 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 AGBL4Q5VU57 503 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 VWA1Q6PCB0 445 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 UBE3DQ7Z6J8 389 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 SEC22AQ96IW7 307 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 SYT17Q9BSW7 474 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 MENTQ9BUN1 341 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 MED20Q9H944 212 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 FAM183AA6NL82 134 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 RNASEK-C17orf49H0YIS7 233 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 SULT1A3P0DMM9 295 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 SULT1A4P0DMN0 295 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 C17orf107Q6ZR85 190 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-201ENST00000282516 KLRC4-KLRK1H3BQV0 150 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 CPEP16870 476 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 HOXC13P31276 330 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 RAB38P57729 211 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 ALKBH1Q13686 389 aaKnown RBP8.05□□□□□ -1.12
NIPBL-201ENST00000282516 RUNX3Q13761 415 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF534Q76KX8 674 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 GPR119Q8TDV5 335 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 TWSG1Q9GZX9 223 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 C12orf10Q9HB07 376 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 RGPD1P0DJD0 1748 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 CDC14CA4D256 554 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 F2P00734 622 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 MT-ATP6P00846 226 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 OPN1LWP04000 364 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 TCRBP04435 133 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 TMEM183BQ1AE95 376 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 TOMM20LQ6UXN7 152 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 HRH3Q9Y5N1 445 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 H7C1C5 153 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 BCAT2O15382 392 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-201ENST00000282516 GOSR1O95249 250 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 TMPRSS11FQ6ZWK6 438 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 NDRG4Q9ULP0 352 aaKnown RBP8.05□□□□□ -1.12
NIPBL-201ENST00000282516 CNMDO75829 334 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 F13BP05160 661 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 CR2P20023 1033 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 CSNK1G2P78368 415 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 ZFP62Q8NB50 900 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-201ENST00000282516 SLC7A6Q92536 515 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 LHX4Q969G2 390 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 HSFX1Q9UBD0 423 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 TRDV1A0A1B0GX56 115 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 SLC5A10A0PJK1 596 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 LGI1O95970 557 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 PDGFAP04085 211 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 SLC25A6P12236 298 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 DOK3Q7L591 496 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms