RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 CCDC58Q4VC31 144 aa12.92□□□□□ -0.34
TRIM23-202ENST00000274327 TEX30Q5JUR7 227 aa12.92□□□□□ -0.34
TRIM23-202ENST00000274327 ARL9Q6T311 187 aa12.92□□□□□ -0.34
TRIM23-202ENST00000274327 RPTNQ6XPR3 784 aa12.92□□□□□ -0.34
TRIM23-202ENST00000274327 LYSMD2Q8IV50 215 aa12.92□□□□□ -0.34
TRIM23-202ENST00000274327 SNIP1Q8TAD8 396 aaKnown RBP12.92□□□□□ -0.34
TRIM23-202ENST00000274327 TMEM54Q969K7 222 aa12.92□□□□□ -0.34
TRIM23-202ENST00000274327 ZNF385AQ96PM9 386 aaKnown RBP12.92□□□□□ -0.34
TRIM23-202ENST00000274327 DCLRE1CQ96SD1 692 aaKnown RBP12.92□□□□□ -0.34
TRIM23-202ENST00000274327 TMED9Q9BVK6 235 aa12.92□□□□□ -0.34
TRIM23-202ENST00000274327 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 HSPB2A8KAH6 182 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 LOC110117498-PIK3R3F6TDL0 507 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 GABRPO00591 440 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 UPK3AO75631 287 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 ZNF432O94892 652 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 MPZL1O95297 269 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 EIF1AXP47813 144 aaKnown RBP12.91□□□□□ -0.34
TRIM23-202ENST00000274327 ZNF133P52736 654 aaPredicted RBP12.91□□□□□ -0.34
TRIM23-202ENST00000274327 ADAM8P78325 824 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 TRAM1Q15629 374 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 HSPB2Q16082 182 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 C22orf42Q6IC83 251 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 RPL22L1Q6P5R6 122 aaKnown RBP12.91□□□□□ -0.34
TRIM23-202ENST00000274327 TMEM91Q6ZNR0 172 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 GLB1L2Q8IW92 636 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 HAVCR2Q8TDQ0 301 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 ASB17Q8WXJ9 295 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 MCHR2Q969V1 340 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 CPNE4Q96A23 557 aaPredicted RBP12.91□□□□□ -0.34
TRIM23-202ENST00000274327 OR2M2Q96R28 347 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 AMELYQ99218 206 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 CCDC32Q9BV29 185 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 TIGARQ9NQ88 270 aa12.91□□□□□ -0.34
TRIM23-202ENST00000274327 ACOT7O00154 380 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 RGS9O75916 674 aaPredicted RBP12.9□□□□□ -0.34
TRIM23-202ENST00000274327 TACSTD2P09758 323 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 OR8G3PP0DMU2 310 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 SOX6P35712 828 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 MRPL28Q13084 256 aaKnown RBP12.9□□□□□ -0.34
TRIM23-202ENST00000274327 SLC10A1Q14973 349 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 MEP1BQ16820 701 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 RNFT1Q5M7Z0 435 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 OTPQ5XKR4 325 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 CARD17Q5XLA6 110 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 SLC18B1Q6NT16 456 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 AKAP14Q86UN6 197 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 TMEM123Q8N131 208 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 ZNF454Q8N9F8 522 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 THEM6Q8WUY1 208 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 NSMAFQ92636 917 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 HPS1Q92902 700 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 SMIM19Q96E16 107 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 OR8B4Q96RC9 309 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 ZDHHC11Q9H8X9 412 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 ING1Q9UK53 422 aaPredicted RBP12.9□□□□□ -0.34
TRIM23-202ENST00000274327 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
TRIM23-202ENST00000274327 TRAV17A0A0B4J275 112 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 PSMD9O00233 223 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 CYTIPO60759 359 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 AQP8O94778 261 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 ITGB2P05107 769 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 KRT8P05787 483 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 SPARCP09486 303 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 NR2C1P13056 603 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 ZNF823P16415 610 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 LAP3P28838 519 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 RPS19P39019 145 aaKnown RBP12.9□□□□□ -0.34
TRIM23-202ENST00000274327 PSMB10P40306 273 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 SLC3A1Q07837 685 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 TMEM53Q6P2H8 277 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 LRFN4Q6PJG9 635 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 LRRC69Q6ZNQ3 347 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 SETD6Q8TBK2 473 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 C11orf40Q8WZ69 217 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 ROBO4Q8WZ75 1007 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 ZNF845Q96IR2 970 aaPredicted RBP12.9□□□□□ -0.34
TRIM23-202ENST00000274327 KCTD7Q96MP8 289 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 MED18Q9BUE0 208 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 CDADC1Q9BWV3 514 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 HDHD5Q9BXW7 423 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 GLTPQ9NZD2 209 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 GSTK1Q9Y2Q3 226 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 MSRB2Q9Y3D2 182 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 LIPGQ9Y5X9 500 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 FLVCR1Q9Y5Y0 555 aa12.9□□□□□ -0.34
TRIM23-202ENST00000274327 ZNF407Q9C0G0 2248 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 A0A075B6Q4 140 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 SC5DO75845 299 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 ACTL6AO96019 429 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 IL1AP01583 271 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 QDPRP09417 244 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 EDNRAP25101 427 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 CSNK1A1P48729 337 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 GDI2P50395 445 aaKnown RBP12.89□□□□□ -0.35
TRIM23-202ENST00000274327 ROM1Q03395 351 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 C10orf128Q5T292 105 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 LIPNQ5VXI9 398 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 FAM220AQ7Z4H9 259 aa12.89□□□□□ -0.35
TRIM23-202ENST00000274327 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms