RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SPATC1Q76KD6 591 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 PIP4P1Q86T03 277 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 GLB1L2Q8IW92 636 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 BEST3Q8N1M1 668 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 ZNF676Q8N7Q3 588 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 OR51A4Q8NGJ6 313 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 ADAMTS17Q8TE56 1095 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 A0A0B4J203 849 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 A0A0G2JMP0 313 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 A0A0X1KG70 313 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 LOC101059948A0A1B0GTJ6 334 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 GPR171O14626 319 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 PDCD5O14737 125 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 RAD1O60671 282 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 SNRPBP14678 240 aaKnown RBP14.82□□□□□ -0.04
CCDC40-201ENST00000269318 RBMS1P29558 406 aaKnown RBP14.82□□□□□ -0.04
CCDC40-201ENST00000269318 SOX2P48431 317 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 RIDAP52758 137 aaKnown RBP14.82□□□□□ -0.04
CCDC40-201ENST00000269318 B3GALT5-AS1P59052 145 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 MFGE8Q08431 387 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-201ENST00000269318 CAMK2DQ13557 499 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 TRIP6Q15654 476 aaKnown RBP14.82□□□□□ -0.04
CCDC40-201ENST00000269318 OR7E24Q6IFN5 339 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 HDDC2Q7Z4H3 204 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 DCXRQ7Z4W1 244 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 IL17RDQ8NFM7 739 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 OR4M2Q8NGB6 313 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 GPR148Q8TDV2 347 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 C11orf40Q8WZ69 217 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 PARD6AQ9NPB6 346 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 MRPS18BQ9Y676 258 aaKnown RBP14.82□□□□□ -0.04
CCDC40-201ENST00000269318 LRRC3CA6NJW4 275 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 IFITM5A6NNB3 132 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 PLA2G10O15496 165 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 TNFSF15O95150 251 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 RAF1P04049 648 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 ZNF43P17038 809 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 SRD5A2P31213 254 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 CD97P48960 835 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 CLRN1P58418 232 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 RAC1P63000 192 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 CSRP2Q16527 193 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 HIST3H3Q16695 136 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 STAC2Q6ZMT1 411 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 GLRX5Q86SX6 157 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 CATSPERDQ86XM0 798 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 LINC00346Q8IVM7 164 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 THOC3Q96J01 351 aaKnown RBP14.81□□□□□ -0.04
CCDC40-201ENST00000269318 PIGQQ9BRB3 760 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 FAM117AQ9C073 453 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 SPATA2Q9UM82 520 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 SLC22A13Q9Y226 551 aa14.81□□□□□ -0.04
CCDC40-201ENST00000269318 AIPO00170 330 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 ADRA2CP18825 462 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 LAP3P28838 519 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 TALDO1P37837 337 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 CYB561P49447 251 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 NUBP1P53384 320 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 ODF4Q2M2E3 257 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 JMJD6Q6NYC1 403 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-201ENST00000269318 SLC25A47Q6Q0C1 308 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 LRRTM1Q86UE6 522 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 CELF2-AS1Q8N7Q2 184 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 DRAXINQ8NBI3 349 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-201ENST00000269318 MCHR2Q969V1 340 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 NEDD4LQ96PU5 975 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 C11orf54Q9H0W9 315 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-201ENST00000269318 BRD7Q9NPI1 651 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 DEPPQ9NTK1 212 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 FREM2Q5SZK8 3169 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 MED12Q93074 2177 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 ARPC4-TTLL3A0A0A6YYG9 625 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 LINC00854A0A1B0GVQ3 168 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 BOLA2-SMG1P6H3BVE0 249 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 TMEM127O75204 238 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 PITPNBP48739 271 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 DEGS2Q6QHC5 323 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 RAB43Q86YS6 212 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 RNF133Q8WVZ7 376 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 PPP1R14AQ96A00 147 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 TMEM106AQ96A25 262 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 TCF7L1Q9HCS4 588 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 CYB5R1Q9UHQ9 305 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 R4GMQ9 66 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 V9GY05 133 aa14.8□□□□□ -0.04
CCDC40-201ENST00000269318 CACNA1HO95180 2353 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 TRAV8-7A0A075B6U6 113 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 A0A0J9YW62 118 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 EIF1BO60739 113 aaKnown RBP14.79□□□□□ -0.04
CCDC40-201ENST00000269318 SLC43A1O75387 559 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 RFPL3SP0C7P2 107 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 GPR85P60893 370 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 MFAP5Q13361 173 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 TRIQKQ629K1 86 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 CORO6Q6QEF8 472 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 LGALS14Q8TCE9 139 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 CMTM3Q96MX0 182 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 B3GNT4Q9C0J1 378 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 SLC22A4Q9H015 551 aa14.79□□□□□ -0.04
CCDC40-201ENST00000269318 STMN3Q9NZ72 180 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms