RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 A0A0A6YYD5 115 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 H7C1Q1 480 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 TP53I11O14683 189 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 OR2F2O95006 317 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 IFNA10P01566 189 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 IFNA4P05014 189 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 CEACAM5P06731 702 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 RRASP10301 218 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 ACSM1Q08AH1 577 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 OR2F1Q13607 317 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 IRF3Q14653 427 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 KCNAB1Q14722 419 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 CDONQ4KMG0 1287 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 PARM1Q6UWI2 310 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 OR13H1Q8NG92 308 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 NICN1Q9BSH3 213 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 SLC7A11Q9UPY5 501 aa10.56□□□□□ -0.72
VPS33A-201ENST00000267199 CXorf51AA0A1B0GTR3 108 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.55□□□□□ -0.72
VPS33A-201ENST00000267199 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.55□□□□□ -0.72
VPS33A-201ENST00000267199 NPIPA2E9PIF3 369 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 NPIPA3F8WFD2 350 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 FFAR1O14842 300 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF44P15621 663 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 SERPINF1P36955 418 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 CDK5Q00535 292 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 BDH1Q02338 343 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 ZP2Q05996 745 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 SLC30A7Q8NEW0 376 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 MIB2Q96AX9 1013 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 FGGYQ96C11 551 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 STACQ99469 402 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 TMEM59Q9BXS4 323 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 SLC19A3Q9BZV2 496 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 CHRDQ9H2X0 955 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 SNRPGP15A8MWD9 76 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 TNFRSF4P43489 277 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 PMPCAQ10713 525 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 LGALSLQ3ZCW2 172 aaPredicted RBP10.55□□□□□ -0.72
VPS33A-201ENST00000267199 GLYR1Q49A26 553 aaPredicted RBP10.55□□□□□ -0.72
VPS33A-201ENST00000267199 GLDNQ6ZMI3 551 aaPredicted RBP10.55□□□□□ -0.72
VPS33A-201ENST00000267199 STAC2Q6ZMT1 411 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 OR5L2Q8NGL0 311 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 SLC2A12Q8TD20 617 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 NUDCD2Q8WVJ2 157 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 PNPLA2Q96AD5 504 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 PRDM7Q9NQW5 492 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 FBXO7Q9Y3I1 522 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 MYOFQ9NZM1 2061 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 NME2P1O60361 137 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 IFNA1P01562 189 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 GLAP06280 429 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 CALCBP10092 127 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 SLC2A1P11166 492 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF43P17038 809 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 CSF2RBP32927 897 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 TRHRP34981 398 aaPredicted RBP10.55□□□□□ -0.72
VPS33A-201ENST00000267199 LBX1P52954 281 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 CHRDL2Q6WN34 429 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 LILRB2Q8N423 598 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 OR4D9Q8NGE8 314 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 SGCZQ96LD1 299 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 SPACA5Q96QH8 159 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF160Q9HCG1 818 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 LYRM4Q9HD34 91 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 DKKL1Q9UK85 242 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 RUNX2Q13950 521 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 FBXW12Q6X9E4 464 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 ADGRE4PQ86SQ3 457 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF687Q8N1G0 1237 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 LINC01555Q8NAE3 123 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 RSC1A1Q92681 617 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 MR1Q95460 341 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 WDR34Q96EX3 536 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 NRSN2Q9GZP1 204 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 MOKQ9UQ07 419 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 SLC22A13Q9Y226 551 aa10.55□□□□□ -0.72
VPS33A-201ENST00000267199 DNAJC13O75165 2243 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 SMCO3A2RU48 225 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 LPLP06858 475 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 MGMTP16455 207 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 AVPR2P30518 371 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 CTHP32929 405 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 CX3CR1P49238 355 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 C19orf57Q0VDD7 668 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 IGSF11Q5DX21 431 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 SLC22A25Q6T423 547 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 MDGA2Q7Z553 956 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 MARCH3Q86UD3 253 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 UEVLDQ8IX04 471 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 GIMAP5Q96F15 307 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 FN3KRPQ9HA64 309 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 TAF9BQ9HBM6 251 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 SPACA1Q9HBV2 294 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 ZFP57Q9NU63 452 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 TAS2R4Q9NYW5 299 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 IL20Q9NYY1 176 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 DHCR7Q9UBM7 475 aaKnown RBP10.54□□□□□ -0.72
VPS33A-201ENST00000267199 TDRD15B5MCY1 1934 aaKnown RBP10.54□□□□□ -0.72
VPS33A-201ENST00000267199 DIO1P49895 249 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms