RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 B3GNT4Q9C0J1 378 aa8.34□□□□□ -1.07
SSR3-201ENST00000265044 HHLA2Q9UM44 414 aa8.34□□□□□ -1.07
SSR3-201ENST00000265044 LSM2Q9Y333 95 aaKnown RBP8.34□□□□□ -1.07
SSR3-201ENST00000265044 PCNX3Q9H6A9 2034 aa8.34□□□□□ -1.07
SSR3-201ENST00000265044 A0A0J9YW62 118 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 MS4A18H0YCH9 400 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ZNF432O94892 652 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 RFPL3SP0C7P2 107 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 LIPCP11150 499 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 BDH1Q02338 343 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 MS4A18Q3C1V0 323 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 CENPSQ8N2Z9 138 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 Q8N402 240 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 CHST4Q8NCG5 386 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 HAVCR2Q8TDQ0 301 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ZNRF4Q8WWF5 429 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 MIB2Q96AX9 1013 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 TRMT61AQ96FX7 289 aaKnown RBP8.33□□□□□ -1.08
SSR3-201ENST00000265044 GPX7Q96SL4 187 aaPredicted RBP8.33□□□□□ -1.08
SSR3-201ENST00000265044 MFRPQ9BY79 579 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 MCUBQ9NWR8 336 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 LUZP4Q9P127 313 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 MYEF2Q9P2K5 600 aaKnown RBP8.33□□□□□ -1.08
SSR3-201ENST00000265044 HRH3Q9Y5N1 445 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ICE1Q9Y2F5 2266 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 TMEM212A6NML5 194 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 WISP1O95388 367 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 HCKP08631 526 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ALOX5APP20292 161 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 MRPL28Q13084 256 aaKnown RBP8.33□□□□□ -1.08
SSR3-201ENST00000265044 Q499Y3 187 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 MZT2BQ6NZ67 158 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ZNF704Q6ZNC4 412 aaPredicted RBP8.33□□□□□ -1.08
SSR3-201ENST00000265044 FCRLAQ7L513 359 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 SERPINA12Q8IW75 414 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 SULF2Q8IWU5 870 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ZNF101Q8IZC7 436 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 OR2M7Q8NG81 312 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 HSD17B8Q92506 261 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 WACQ9BTA9 647 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 DDX28Q9NUL7 540 aaKnown RBP8.33□□□□□ -1.08
SSR3-201ENST00000265044 GLTPQ9NZD2 209 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 SLC5A6Q9Y289 635 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 TRAPPC4Q9Y296 219 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 SIRT4Q9Y6E7 314 aaPredicted RBP8.33□□□□□ -1.08
SSR3-201ENST00000265044 COL6A6A6NMZ7 2263 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ROS1P08922 2347 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 A0A0G2JMM0 328 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 A0A1W2PPB8 328 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 A0A1W2PRS3 328 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 CIB4A0PJX0 185 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 KIR3DP1A8MWS1 328 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 TAF4O00268 1085 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 GATBO75879 557 aaKnown RBP8.33□□□□□ -1.08
SSR3-201ENST00000265044 ZFPL1O95159 310 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ONECUT2O95948 504 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 CD82P27701 267 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 HOXC12P31275 282 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 OR10A3P58181 314 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 CCDC58Q4VC31 144 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 RNLSQ5VYX0 342 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 SFXN4Q6P4A7 337 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 PLET1Q6UQ28 207 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 FAM122BQ7Z309 247 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ZNF227Q86WZ6 799 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ZADH2Q8N4Q0 377 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 CNEP1R1Q8N9A8 125 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 NOXO1Q8NFA2 376 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 OR2G2Q8NGZ5 317 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 ASB10Q8WXI3 467 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 SLAMF6Q96DU3 332 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 SIGLEC12Q96PQ1 595 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 EMC3Q9P0I2 261 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 V9GY05 133 aa8.33□□□□□ -1.08
SSR3-201ENST00000265044 P2RY10O00398 339 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 GPR171O14626 319 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 PLPP2O43688 288 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 LCATP04180 440 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 CD79AP11912 226 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 CEACAM1P13688 526 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 SNRPBP14678 240 aaKnown RBP8.32□□□□□ -1.08
SSR3-201ENST00000265044 SRMP19623 302 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 RANBP1P43487 201 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 MTNR1BP49286 362 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 RAC3P60763 192 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 EFNB1P98172 346 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 SLC17A1Q14916 467 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 YIF1BQ5BJH7 314 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 GLT8D1Q68CQ7 371 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 FAM57BQ71RH2 274 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 SLC16A14Q7RTX9 510 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 OR52N5Q8NH56 324 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 POC1BQ8TC44 478 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 ACOT12Q8WYK0 555 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 THRSPQ92748 146 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 KISS1RQ969F8 398 aaPredicted RBP8.32□□□□□ -1.08
SSR3-201ENST00000265044 MCHR2Q969V1 340 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 NEK6Q9HC98 313 aa8.32□□□□□ -1.08
SSR3-201ENST00000265044 NKIRAS2Q9NYR9 191 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms