RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CISD1Q9NZ45 108 aaKnown RBP6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 ASH2LQ9UBL3 628 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 REV1Q9UBZ9 1251 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 ST6GALNAC2Q9UJ37 374 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 FZR1Q9UM11 496 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 ATP23Q9Y6H3 246 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 TVP23AA6NH52 213 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 IGKV3-15P01624 115 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 FAM157BP0CG42 384 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 PTAFRP25105 342 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 ARHGDIAP52565 204 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 NAAAQ02083 359 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 GABPB1Q06547 395 aaPredicted RBP6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 PGGHGQ32M88 737 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 FAM205BPQ63HN1 556 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 ACSM5Q6NUN0 579 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 YTHDF3Q7Z739 585 aaKnown RBP6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 ADCK1Q86TW2 530 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZDHHC13Q8IUH4 622 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR5K1Q8NHB7 308 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 NANOS1Q8WY41 292 aaKnown RBP6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 POP5Q969H6 163 aaKnown RBP6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 FBXW5Q969U6 566 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 CCL19Q99731 98 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 TMEM204Q9BSN7 226 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 BDH2Q9BUT1 245 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 KRT84Q9NSB2 600 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 B3GNT2Q9NY97 397 aa6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 STX18Q9P2W9 335 aaKnown RBP6.29□□□□□ -1.4
DEPDC1B-201ENST00000265036 ARPC4-TTLL3A0A0A6YYG9 625 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 IGHV2OR16-5A0A0B4J2B6 119 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 E7EQL1 145 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 EI24O14681 340 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 HS3ST1O14792 307 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 GPRIN2O60269 458 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 BAG2O95816 211 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 RENP00797 406 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 CRYAAP02489 173 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 GSTM3P21266 225 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 MSR1P21757 451 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 POLR2IP36954 125 aaKnown RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 MRPS34P82930 218 aaKnown RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 HSF2Q03933 536 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 SNTB2Q13425 540 aaKnown RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 ENDOGQ14249 297 aaKnown RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 GINS1Q14691 196 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF672Q499Z4 452 aaPredicted RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 PABPC1L2AQ5JQF8 200 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF774Q6NX45 483 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 TMEM154Q6P9G4 183 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC37A3Q8NCC5 494 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 NPEPL1Q8NDH3 523 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 PROKR2Q8NFJ6 384 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR6K6Q8NGW6 343 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 PERPQ96FX8 193 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 SIAEQ9HAT2 523 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 POLE4Q9NR33 117 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 PAPOLBQ9NRJ5 636 aaKnown RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 VSX1Q9NZR4 365 aaPredicted RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 IGLV1-36A0A0B4J1U3 117 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 ARPC3O15145 178 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 MGRN1O60291 552 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 UBL3O95164 117 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 TXNDC12O95881 172 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 IGLV1-44P01699 117 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 MMP7P09237 267 aaPredicted RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 PSKH1P11801 424 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 FCGR1AP12314 374 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 NR2C1P13056 603 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF14P17017 642 aaPredicted RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 IGFBP5P24593 272 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 GUCA1AP43080 201 aaPredicted RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 ERVS71-1P61550 626 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 LRRC36Q1X8D7 754 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC36A2Q495M3 483 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF362Q5T0B9 420 aaPredicted RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 RPL13AP3Q6NVV1 102 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC27A4Q6P1M0 643 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 FAHD1Q6P587 224 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF627Q7L945 461 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 BCDIN3DQ7Z5W3 292 aaKnown RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 LNX2Q8N448 690 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 CPEB3Q8NE35 698 aaKnown RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC30A7Q8NEW0 376 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 BBS1Q8NFJ9 593 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 C11orf40Q8WZ69 217 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 STMN2Q93045 179 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 CENPNQ96H22 339 aaPredicted RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF75AQ96N20 296 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 USB1Q9BQ65 265 aaKnown RBP6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 RIBC2Q9H4K1 309 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 CCNB1IP1Q9NPC3 277 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 OBP2BQ9NPH6 170 aa6.28□□□□□ -1.4
DEPDC1B-201ENST00000265036 ARRDC5A6NEK1 342 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 RIIAD1A6NNX1 92 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 CENPBD1B2RD01 187 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 RER1O15258 196 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 DOK2O60496 412 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 NDUFS7O75251 213 aa6.27□□□□□ -1.4
DEPDC1B-201ENST00000265036 KHDRBS3O75525 346 aaKnown RBP6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms