RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SLC25A28Q96A46 364 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 C4orf45Q96LM5 186 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 NUDT22Q9BRQ3 303 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 LRRC61Q9BV99 259 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 REG4Q9BYZ8 158 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 PTTG3PQ9NZH4 202 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 DHDHQ9UQ10 334 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 COA3Q9Y2R0 106 aaPredicted RBP8.23□□□□□ -1.09
MSH4-201ENST00000263187 MRPS18BQ9Y676 258 aaKnown RBP8.23□□□□□ -1.09
MSH4-201ENST00000263187 SDK2Q58EX2 2172 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 RAB3DO95716 219 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 HOXD4P09016 255 aaPredicted RBP8.23□□□□□ -1.09
MSH4-201ENST00000263187 IL12BP29460 328 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 DMWDQ09019 674 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 SLC36A1Q7Z2H8 476 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 EXD3Q8N9H8 876 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 SLC25A44Q96H78 314 aaPredicted RBP8.23□□□□□ -1.09
MSH4-201ENST00000263187 ZNF75AQ96N20 296 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 EMC6Q9BV81 110 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 PRR13Q9NZ81 148 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 CLPSP04118 112 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 FAUP35544 74 aaKnown RBP8.22□□□□□ -1.09
MSH4-201ENST00000263187 GNALP38405 381 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 EFNA3P52797 238 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 NR0B2Q15466 257 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 OLFML2AQ68BL7 652 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 ANKRD16Q6P6B7 361 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 KCTD9Q7L273 389 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 GPAT4Q86UL3 456 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 WDFY1Q8IWB7 410 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 ZNF417Q8TAU3 575 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 DCBLD2Q96PD2 775 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 TBL1XR1Q9BZK7 514 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 DUSP15Q9H1R2 295 aaPredicted RBP8.22□□□□□ -1.09
MSH4-201ENST00000263187 MTIF3Q9H2K0 278 aaKnown RBP8.22□□□□□ -1.09
MSH4-201ENST00000263187 MRPL22Q9NWU5 206 aaKnown RBP8.22□□□□□ -1.09
MSH4-201ENST00000263187 PFDN2Q9UHV9 154 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 GMEB2Q9UKD1 530 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 VDAC3Q9Y277 283 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 NOP16Q9Y3C1 178 aaKnown RBP8.22□□□□□ -1.09
MSH4-201ENST00000263187 AUP1Q9Y679 476 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 COL6A3P12111 3177 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 PRRC2CQ9Y520 2896 aaKnown RBP8.22□□□□□ -1.09
MSH4-201ENST00000263187 TRBV5-5A0A0J9YX44 114 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 SPTY2D1-AS1A0A0U1RR47 76 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 TEX51A0A1B0GUA7 166 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 SLC22A23A1A5C7 686 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 TNFRSF10CO14798 259 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 AKAIN1P0CW23 69 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 PNMTP11086 282 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 CAPZA2P47755 286 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 SLC37A1P57057 533 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 SKP1P63208 163 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 INSM1Q01101 510 aaPredicted RBP8.22□□□□□ -1.09
MSH4-201ENST00000263187 NSDHLQ15738 373 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 PRTGQ2VWP7 1150 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 GFOD2Q3B7J2 385 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 RGS7BPQ6MZT1 257 aaPredicted RBP8.22□□□□□ -1.09
MSH4-201ENST00000263187 RNF144BQ7Z419 303 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 ZNF546Q86UE3 836 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 ADGRG3Q86Y34 549 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 ZNF595Q8IYB9 648 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 TDHQ8IZJ6 230 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 GABRG1Q8N1C3 465 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 SPICQ8N5J4 248 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 STEAP2Q8NFT2 490 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 OTOSQ8NHW6 89 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 WBP1Q96G27 269 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 MED29Q9NX70 200 aa8.22□□□□□ -1.09
MSH4-201ENST00000263187 MFSD2BA6NFX1 497 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 TMEM212A6NML5 194 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 P2RY10O00398 339 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 ZNF254O75437 659 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 OR4E1P0C645 316 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 M6PRP20645 277 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 VAMP1P23763 118 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 AVPR2P30518 371 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 DNASE1L1P49184 302 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 FUT7Q11130 342 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 GK2Q14410 553 aaPredicted RBP8.21□□□□□ -1.09
MSH4-201ENST00000263187 SLC17A1Q14916 467 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 CDNFQ49AH0 187 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 EEF1A1P5Q5VTE0 462 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 ZNF660Q6AZW8 331 aaPredicted RBP8.21□□□□□ -1.09
MSH4-201ENST00000263187 C3orf33Q6P1S2 294 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 UNQ6126/PRO20091Q6UXV3 157 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 BEST3Q8N1M1 668 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 PNPLA2Q96AD5 504 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 ZNF587Q96SQ5 575 aaPredicted RBP8.21□□□□□ -1.09
MSH4-201ENST00000263187 ABHD6Q9BV23 337 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 NUDT9Q9BW91 350 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 WDR13Q9H1Z4 485 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 APMAPQ9HDC9 416 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 MED11Q9P086 117 aa8.21□□□□□ -1.09
MSH4-201ENST00000263187 KIR2DS5A0A0G2JLQ3 304 aa8.21□□□□□ -1.1
MSH4-201ENST00000263187 A0A0G2JNG1 304 aa8.21□□□□□ -1.1
MSH4-201ENST00000263187 TMEM82A0PJX8 343 aa8.21□□□□□ -1.1
MSH4-201ENST00000263187 EEF1E1-BLOC1S5C9J1V9 151 aa8.21□□□□□ -1.1
MSH4-201ENST00000263187 H3BML4 177 aa8.21□□□□□ -1.1
MSH4-201ENST00000263187 KIR2DS3K7RE56 304 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms