RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CCDC58Q4VC31 144 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 PLXDC2Q6UX71 529 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 FOXL2NBQ6ZUU3 175 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 OR8B4Q96RC9 309 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 TM9SF2Q99805 663 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 RNF122Q9H9V4 155 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 SSR3Q9UNL2 185 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 LHX6Q9UPM6 363 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 CEP295Q9C0D2 2601 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 UPK3AO75631 287 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 KRT8P05787 483 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 TACSTD2P09758 323 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 TGM4P49221 684 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 ROM1Q03395 351 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 EIF2B1Q14232 305 aaKnown RBP20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 CDK5R1Q15078 307 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 INAQ16352 499 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 CHMP1BQ7LBR1 199 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 FAM220AQ7Z4H9 259 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 RPS4Y2Q8TD47 263 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 SNRNP27Q8WVK2 155 aaKnown RBP20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 EXTL1Q92935 676 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 ABHD6Q9BV23 337 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 BCO1Q9HAY6 547 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 EXOSC4Q9NPD3 245 aaKnown RBP20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 SLCO1C1Q9NYB5 712 aa20.26■□□□□ 0.83
SMARCB1-201ENST00000263121 DNAJC13O75165 2243 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 ACACAQ13085 2346 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 HSPB2A8KAH6 182 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 CDAP32320 146 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 FABP5Q01469 135 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 MRPL28Q13084 256 aaKnown RBP20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 HSPB2Q16082 182 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 RPL22L1Q6P5R6 122 aaKnown RBP20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 ARL9Q6T311 187 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 USP43Q70EL4 1123 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 OR10H5Q8NGA6 315 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 DYNC2LI1Q8TCX1 351 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 HAVCR2Q8TDQ0 301 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 ST7LQ8TDW4 575 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 PGLYRP3Q96LB9 341 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 TMED9Q9BVK6 235 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 PRRG4Q9BZD6 226 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 ULBP2Q9BZM5 246 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 DCSTAMPQ9H295 470 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 SEC61A2Q9H9S3 476 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 POLE4Q9NR33 117 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 TXNL4BQ9NX01 149 aaKnown RBP20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 EMC3Q9P0I2 261 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 CYB5R1Q9UHQ9 305 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 IKZF2Q9UKS7 526 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 SPTBN4Q9H254 2564 aa20.25■□□□□ 0.83
SMARCB1-201ENST00000263121 TRDV1A0A1B0GX56 115 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 ZNF724A8MTY0 619 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 DHHO43323 396 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 PSMB10P40306 273 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 LSAMPQ13449 338 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 RNPS1Q15287 305 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 PLEKHN1Q494U1 663 aaPredicted RBP20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 LIPNQ5VXI9 398 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 YIPF7Q8N8F6 280 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 KBTBD8Q8NFY9 601 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 OR52N5Q8NH56 324 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 SMIM19Q96E16 107 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 COQ7Q99807 217 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 TP53TG5Q9Y2B4 290 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 ZNF175Q9Y473 711 aa20.24■□□□□ 0.83
SMARCB1-201ENST00000263121 URB1O60287 2271 aaKnown RBP20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 WNT11O96014 354 aa20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 HLA-DPB1P04440 258 aa20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 CD1AP06126 327 aa20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 GALP22466 123 aa20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 FGF9P31371 208 aaPredicted RBP20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 KCTD18Q6PI47 426 aaPredicted RBP20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 DCXRQ7Z4W1 244 aa20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 LINC00346Q8IVM7 164 aa20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 ZNF679Q8IYX0 411 aa20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 EMC7Q9NPA0 242 aa20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 NOSIPQ9Y314 301 aaKnown RBP20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 DMXL2Q8TDJ6 3036 aa20.23■□□□□ 0.83
SMARCB1-201ENST00000263121 TMCC2O75069 709 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 EDNRAP25101 427 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 SLC3A1Q07837 685 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 LRRN1Q6UXK5 716 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 ADGRE4PQ86SQ3 457 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 DCLRE1CQ96SD1 692 aaKnown RBP20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 CDADC1Q9BWV3 514 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 ELOVL3Q9HB03 270 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 LHFPL6Q9Y693 200 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 PIEZO1Q92508 2521 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 A0A087WV48 116 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 GDI2P50395 445 aaKnown RBP20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 NANOS3P60323 173 aaKnown RBP20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 TUBA1BP68363 451 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 TRAM1Q15629 374 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 RIPPLY2Q5TAB7 128 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 TUBA1AQ71U36 451 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 TUSC5Q8IXB3 177 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 NABP1Q96AH0 204 aa20.22■□□□□ 0.83
SMARCB1-201ENST00000263121 SARAFQ96BY9 339 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms