RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 LINC01387J3KSC0 135 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 BET1O15155 118 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 RAMP1O60894 148 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 THBS2P35442 1172 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 FOLR3P41439 243 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 CLDN12P56749 244 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 NTRK2Q16620 822 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 EMC4Q5J8M3 183 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 ZNF684Q5T5D7 378 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 MTFR2Q6P444 385 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 LINC00346Q8IVM7 164 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 C19orf18Q8NEA5 215 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 OR2M3Q8NG83 312 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 OR11H4Q8NGC9 324 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 OR51A4Q8NGJ6 313 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 OR2Y1Q8NGV0 311 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 STK35Q8TDR2 534 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 ST8SIA1Q92185 356 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 ST8SIA4Q92187 359 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 IMMP1LQ96LU5 166 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 ZNF222Q9UK12 451 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 MOKQ9UQ07 419 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 NSG1A0A0A6YYJ2 146 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 ZNF814B7Z6K7 855 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 TEX46H3BTG2 121 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 UPK3AO75631 287 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 ATF1P18846 271 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 RAB3BP20337 219 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 ACP1P24666 158 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 EVX1P49640 407 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 ADAM8P78325 824 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 EXOSC2Q13868 293 aaKnown RBP12.17□□□□□ -0.46
VMP1-201ENST00000262291 FCN2Q15485 313 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 HES5Q5TA89 166 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 CARD17Q5XLA6 110 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 TRIQKQ629K1 86 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 RAB11FIP2Q7L804 512 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 FAM220AQ7Z4H9 259 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 IZUMO1Q8IYV9 350 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 LINC00518Q8N0U6 118 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 TRMT10AQ8TBZ6 339 aaKnown RBP12.17□□□□□ -0.46
VMP1-201ENST00000262291 DERL3Q96Q80 235 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 UQCC2Q9BRT2 126 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 PPA2Q9H2U2 334 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 SCPEP1Q9HB40 452 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 RDH8Q9NYR8 311 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 LOC102723996A0A087X1L8 192 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 NPIPA5E9PKD4 350 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 OR2T1O43869 369 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 DKK1O94907 266 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 ALOX5APP20292 161 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 AVPR2P30518 371 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 APOBEC1P41238 236 aaKnown RBP12.17□□□□□ -0.46
VMP1-201ENST00000262291 TMEM176BQ3YBM2 270 aaPredicted RBP12.17□□□□□ -0.46
VMP1-201ENST00000262291 IGSF11Q5DX21 431 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 DCAF12Q5T6F0 453 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 HBMQ6B0K9 141 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 CORO6Q6QEF8 472 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 H1FNTQ75WM6 255 aaPredicted RBP12.17□□□□□ -0.46
VMP1-201ENST00000262291 Q8N402 240 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 MS4A15Q8N5U1 240 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 GDPD1Q8N9F7 314 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 DNAAF1Q8NEP3 725 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 KLHL15Q96M94 604 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 LINC00052Q96N35 136 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 ELOVL3Q9HB03 270 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 MRPL39Q9NYK5 338 aaKnown RBP12.17□□□□□ -0.46
VMP1-201ENST00000262291 NXT1Q9UKK6 140 aaKnown RBP12.17□□□□□ -0.46
VMP1-201ENST00000262291 NPIPA1Q9UND3 350 aa12.17□□□□□ -0.46
VMP1-201ENST00000262291 A0A1W2PNU3 283 aaPredicted RBP12.16□□□□□ -0.46
VMP1-201ENST00000262291 EIF1AXP47813 144 aaKnown RBP12.16□□□□□ -0.46
VMP1-201ENST00000262291 MZT2AQ6P582 158 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 TMEM156Q8N614 296 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 ZNF248Q8NDW4 579 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 DDIT4LQ96D03 193 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 ZNF700Q9H0M5 742 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 SLC22A13Q9Y226 551 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 MRPS7Q9Y2R9 242 aaKnown RBP12.16□□□□□ -0.46
VMP1-201ENST00000262291 IGLV1-36A0A0B4J1U3 117 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 RPS10-NUDT3A0A1W2PQS6 291 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 LIPT2A6NK58 231 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 EIF1AYO14602 144 aaKnown RBP12.16□□□□□ -0.46
VMP1-201ENST00000262291 B3GALNT1O75752 331 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 ABHD16AO95870 558 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 CFDP00746 253 aaPredicted RBP12.16□□□□□ -0.46
VMP1-201ENST00000262291 HRGP04196 525 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 CBX5P45973 191 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 BIDP55957 195 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 TOMM20Q15388 145 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 HSD17B12Q53GQ0 312 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 OR7E24Q6IFN5 339 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 OR52H1Q8NGJ2 320 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 CT55Q8WUE5 264 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 PPP1R3EQ9H7J1 279 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 CHST11Q9NPF2 352 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 BRD7Q9NPI1 651 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 PADI1Q9ULC6 663 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 AUP1Q9Y679 476 aa12.16□□□□□ -0.46
VMP1-201ENST00000262291 PHF3Q92576 2039 aaKnown RBP12.15□□□□□ -0.46
VMP1-201ENST00000262291 A0A0G2JMM0 328 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms