RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 CCL21O00585 134 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 TGM6O95932 706 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 DHRS4L1P0CG22 281 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 SP9P0CG40 484 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 ZNF728P0DKX0 622 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 TACR1P25103 407 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 ETV6P41212 452 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 GPR12P47775 334 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 FOXF1Q12946 379 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 Q499Y3 187 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 COX20Q5RI15 118 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 FCRL6Q6DN72 434 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 TBPL2Q6SJ96 375 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 USP51Q70EK9 711 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 CD163Q86VB7 1156 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 STK35Q8TDR2 534 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 SLC26A1Q9H2B4 701 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 COL18A1P39060 1754 aa12.38□□□□□ -0.43
PDGFRB-201ENST00000261799 PRPH2P23942 346 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 GCNT2Q8N0V5 402 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 GGHQ92820 318 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 SLAMF9Q96A28 289 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 C19orf43Q9BQ61 176 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 B3GALT5Q9Y2C3 310 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 CDK1P06493 297 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 CPEP16870 476 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 ECI1P42126 302 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 PGFP49763 221 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 DUSP8Q13202 625 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 SYT14P1Q58G82 188 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 ZNF468Q5VIY5 522 aaPredicted RBP12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 MAELQ96JY0 434 aaKnown RBP12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 AP1S3Q96PC3 154 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 NUBP2Q9Y5Y2 271 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 CACNG2Q9Y698 323 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 NAGAP17050 411 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 MAKP20794 623 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 ACHEP22303 614 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 HLA-DMAP28067 261 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 OPRM1P35372 400 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 HYAL4Q2M3T9 481 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 SPNS3Q6ZMD2 512 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 KDM8Q8N371 416 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 MALSU1Q96EH3 234 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 S1PR5Q9H228 398 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 MYH10P35580 1976 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 A0A1B0GV50 99 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 TUBAL3A6NHL2 446 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 EFSO43281 561 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 DRD5P21918 477 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 RPS16P62249 146 aaKnown RBP12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 BAXQ07812 192 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 TSNAXQ99598 290 aaKnown RBP12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 NRIP3Q9NQ35 241 aa12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 RBMX2Q9Y388 322 aaKnown RBP12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.37□□□□□ -0.43
PDGFRB-201ENST00000261799 A0A1W2PQL4 384 aaPredicted RBP12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 NCR1O76036 304 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 SLC22A5O76082 557 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 GUSBP08236 651 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 PIPP12273 146 aaPredicted RBP12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 ETV4P43268 484 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 FAM74A1Q5RGS3 127 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 BHLHA15Q7RTS1 189 aaPredicted RBP12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 GDPD1Q8N9F7 314 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 SLAMF6Q96DU3 332 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 BCL7BQ9BQE9 202 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 UBQLN2Q9UHD9 624 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 KIR2DS1A0A191URI9 304 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 MASP2O00187 686 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 KIR2DS4P43632 304 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 KIR2DS1Q14954 304 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 YIF1BQ5BJH7 314 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 FHL5Q5TD97 284 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 METTL11BQ5VVY1 283 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 PMS2CLQ68D20 193 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 METAP1DQ6UB28 335 aaPredicted RBP12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 SLC36A1Q7Z2H8 476 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 OR2L13Q8N349 312 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 OR51D1Q8NGF3 324 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 OR2A14Q96R47 310 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 C1orf123Q9NWV4 160 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 COPS3Q9UNS2 423 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 M0R135 149 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 RAB27BO00194 218 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 ZNF799Q96GE5 643 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 TAS2R3Q9NYW6 316 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 TCFL5Q9UL49 500 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 CCDC163A0A0D9SF12 145 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 SOX18P35713 384 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 ALDH3B2P48448 385 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 TAS2R30P59541 319 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 IL13RA1P78552 427 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 H2BFWTQ7Z2G1 175 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 CMTM2Q8TAZ6 248 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 RAB1CQ92928 201 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 VN1R1Q9GZP7 353 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
PDGFRB-201ENST00000261799 IGHV5-51A0A0C4DH38 117 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms