RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CTRCQ99895 268 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 PARD6GQ9BYG4 376 aaPredicted RBP3.23□□□□□ -1.89
CCDC54-201ENST00000261058 PRRG3Q9BZD7 231 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 BCL2L14Q9BZR8 327 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 ASCL3Q9NQ33 180 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 MS4A12Q9NXJ0 267 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 UVRAGQ9P2Y5 699 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 NUP50Q9UKX7 468 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 SAMD4AQ9UPU9 718 aaKnown RBP3.23□□□□□ -1.89
CCDC54-201ENST00000261058 MOKQ9UQ07 419 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 HYOU1Q9Y4L1 999 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 UHRF1BP1LA0JNW5 1464 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 ERICH3Q5RHP9 1530 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 TMEM213A2RRL7 107 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ATP6V1G2-DDX39BF2Z307 99 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 F8W036 122 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 DLGAP1O14490 977 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 PRKAB2O43741 272 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 EFNA2O43921 213 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 N4BP1O75113 896 aaKnown RBP3.22□□□□□ -1.89
CCDC54-201ENST00000261058 CCNKO75909 580 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 VAPBO95292 243 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 FADS2O95864 444 aaKnown RBP3.22□□□□□ -1.89
CCDC54-201ENST00000261058 F10P00742 488 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 CST4P01036 141 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 IGKV3-15P01624 115 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 HBQ1P09105 142 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 OCMP0CE72 109 aaPredicted RBP3.22□□□□□ -1.89
CCDC54-201ENST00000261058 PGCP20142 388 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 HSD11B1P28845 292 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 PRDX3P30048 256 aaKnown RBP3.22□□□□□ -1.89
CCDC54-201ENST00000261058 PHBP35232 272 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ACTR1BP42025 376 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 GSSP48637 474 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 DUSP3P51452 185 aaPredicted RBP3.22□□□□□ -1.89
CCDC54-201ENST00000261058 GNG2P59768 71 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 KRTAP10-3P60369 221 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ACTBP60709 375 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 RAB10P61026 200 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 AP1S1P61966 158 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ARF6P62330 175 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ACTA2P62736 377 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ACTG1P63261 375 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ACTG2P63267 376 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ACTC1P68032 377 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ACTA1P68133 377 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ADARB1P78563 741 aaKnown RBP3.22□□□□□ -1.89
CCDC54-201ENST00000261058 IGLV3-21P80748 117 aaPredicted RBP3.22□□□□□ -1.89
CCDC54-201ENST00000261058 STX3Q13277 289 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 SERTAD2Q14140 314 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 GRB7Q14451 532 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 KCNJ11Q14654 390 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 GGTA1PQ4G0N0 100 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 CELF3Q5SZQ8 465 aaKnown RBP3.22□□□□□ -1.89
CCDC54-201ENST00000261058 TIGD3Q6B0B8 471 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ULK3Q6PHR2 472 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 FAM151BQ6UXP7 276 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 LANCL3Q6ZV70 420 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 HDDC2Q7Z4H3 204 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 MOB3BQ86TA1 216 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 HORMAD1Q86X24 394 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 FBXO36Q8NEA4 188 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 FAF2Q96CS3 445 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 DNAJC1Q96KC8 554 aaKnown RBP3.22□□□□□ -1.89
CCDC54-201ENST00000261058 TSSK3Q96PN8 268 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 KIR2DL4Q99706 377 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 HINT2Q9BX68 163 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 TOLLIPQ9H0E2 274 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 OR2AG1Q9H205 316 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 VCXQ9H320 206 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 PIGUQ9H490 435 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ANKRD19PQ9H560 264 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 C11orf49Q9H6J7 331 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF702PQ9H963 129 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 CD209Q9NNX6 404 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 SAMSN1Q9NSI8 373 aaKnown RBP3.22□□□□□ -1.89
CCDC54-201ENST00000261058 ANAPC7Q9UJX3 599 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 VSIG4Q9Y279 399 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 PEX16Q9Y5Y5 336 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 KIF15Q9NS87 1388 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 WDR7Q9Y4E6 1490 aa3.22□□□□□ -1.89
CCDC54-201ENST00000261058 IGLV8-61A0A075B6I0 122 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 KLF18A0A0U1RQI7 1052 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 SAGE2PA6NJ88 616 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 SMIM23A6NLE4 172 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF729A6NN14 1252 aaPredicted RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF99A8MXY4 864 aaPredicted RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 H7C0C1 242 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 TOR1AO14656 332 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 PFDN6O15212 129 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 TOX3O15405 576 aaPredicted RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 TAPBPO15533 448 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 EMC8O43402 210 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 SCRG1O75711 98 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 H2BFMP0C1H6 154 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ICAM2P13598 275 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 WARSP23381 471 aaKnown RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 CMA1P23946 247 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 CD82P27701 267 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 TEAD1P28347 426 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms