RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 RHNO1Q9BSD3 238 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 MARCH7Q9H992 704 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 EMC7Q9NPA0 242 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 GALNT8Q9NY28 637 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 HAO2Q9NYQ3 351 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 MYO18BQ8IUG5 2567 aa13.86□□□□□ -0.19
CCDC90B-201ENST00000260054 XPNPEP2O43895 674 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 SELENOFO60613 162 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 APOL3O95236 402 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 MRPL3P09001 348 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 PSKH1P11801 424 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 NPR2P20594 1047 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 MSR1P21757 451 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 MTNR1AP48039 350 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 ASCL1P50553 236 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 BLVRAP53004 296 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 TGFBR3Q03167 851 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 GGTLC2Q14390 218 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 GABRA6Q16445 453 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 LCN1P1Q5VSP4 162 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 TIGD4Q8IY51 512 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 BPIFB6Q8NFQ5 453 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 BCL2L2Q92843 193 aaPredicted RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 RNFT2Q96EX2 444 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 SIAEQ9HAT2 523 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 ELOVL5Q9NYP7 299 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 LRCH1Q9Y2L9 728 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 UBR5O95071 2799 aaPredicted RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 CIB4A0PJX0 185 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 SNTNA6NMZ2 147 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 SLC1A7O00341 560 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 HRGP04196 525 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 OR8G3PP0DMU2 310 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 PSMB1P20618 241 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 AGAP20933 346 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 CD79BP40259 229 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 NAA10P41227 235 aaPredicted RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 RPS27P42677 84 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 GUCA1AP43080 201 aaPredicted RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 TMED1Q13445 227 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 ENDOGQ14249 297 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 KCNMB1Q16558 191 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 FBXL19-AS1Q494R0 122 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 NRN1LQ496H8 165 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 HIKESHIQ53FT3 197 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 FAM27BQ5VT28 67 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 ANKRD16Q6P6B7 361 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 XKRXQ6PP77 449 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 SHFQ7M4L6 423 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 ERI1Q8IV48 349 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 LRRC18Q8N456 261 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF808Q8N4W9 903 aaPredicted RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 OR51G2Q8NGK0 314 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 SMAP2Q8WU79 429 aaPredicted RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 ADGRL4Q9HBW9 690 aa13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 RPL36Q9Y3U8 105 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-201ENST00000260054 FLNCQ14315 2725 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 CCKARP32238 428 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 SLC15A1P46059 708 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 CXCR4P61073 352 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 ADAM8P78325 824 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 SRSF1Q07955 248 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 TBRG1Q3YBR2 411 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 BHLHA15Q7RTS1 189 aaPredicted RBP13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 SKA3Q8IX90 412 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF786Q8N393 782 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 C1orf162Q8NEQ5 155 aaPredicted RBP13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 LGALS12Q96DT0 336 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 BOD1Q96IK1 185 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 INTS14Q96SY0 518 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 CNN2Q99439 309 aaKnown RBP13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF416Q9BWM5 594 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 PLCXD1Q9NUJ7 323 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 ZNF224Q9NZL3 707 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 ADGRG4Q8IZF6 3080 aa13.84□□□□□ -0.19
CCDC90B-201ENST00000260054 DPPA5A6NC42 116 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 ZNF503-AS2A6NEH8 195 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 FAM20BO75063 409 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 SBK2P0C263 348 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 RNF224P0DH78 156 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 UGT2B10P36537 528 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 ENTPD1P49961 510 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 LSM6P62312 80 aaKnown RBP13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 OR7E24Q6IFN5 339 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 OR10H5Q8NGA6 315 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 OR4F15Q8NGB8 312 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 OR6N2Q8NGY6 317 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 FGFBP3Q8TAT2 258 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 FBXO17Q96EF6 278 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 YIPF3Q9GZM5 350 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 KCNJ16Q9NPI9 418 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 MRPS18AQ9NVS2 196 aaKnown RBP13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 PSORS1C1Q9UIG5 152 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 LHFPL6Q9Y693 200 aa13.83□□□□□ -0.2
CCDC90B-201ENST00000260054 J3QKU1 62 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 ZNF593O00488 134 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 FARS2O95363 451 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 CLDN14O95500 239 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 SPARCP09486 303 aa13.82□□□□□ -0.2
CCDC90B-201ENST00000260054 PATE4P0C8F1 98 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms