RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PCGF3Q3KNV8 242 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 CA10Q9NS85 328 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 MRPS28Q9Y2Q9 187 aaKnown RBP12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 PLXNA1Q9UIW2 1896 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 CSF3P09919 207 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 BEX5Q5H9J7 111 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 MEX3DQ86XN8 651 aaKnown RBP12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 TMEM185AQ8NFB2 350 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 OR8B3Q8NGG8 313 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 MIB2Q96AX9 1013 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 OR8B2Q96RD0 313 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 FBXO7Q9Y3I1 522 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 BMP5P22003 454 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 ALDH3B1P43353 468 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 CTU2Q2VPK5 515 aaKnown RBP12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 MUS81Q96NY9 551 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 SLC25A19Q9HC21 320 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 PIGLQ9Y2B2 252 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 AKR1C4P17516 323 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 THBS4P35443 961 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 MDH2P40926 338 aaKnown RBP12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 TAS2R19P59542 299 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 NFATC3Q12968 1075 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 TATDN3Q17R31 274 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 SOWAHCQ53LP3 525 aaPredicted RBP12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 PAN3Q58A45 887 aaKnown RBP12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 EXOSC6Q5RKV6 272 aaKnown RBP12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 ADGRG5Q8IZF4 528 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 CYB561A3Q8NBI2 242 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 DCUN1D4Q92564 292 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 SNX18Q96RF0 628 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 ZNF471Q9BX82 626 aaPredicted RBP12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 LNP1A1A4G5 178 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 IGHA2P01877 340 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 ALDOCP09972 364 aaKnown RBP12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 CTSSP25774 331 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 ANKRD16Q6P6B7 361 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 PLXDC2Q6UX71 529 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 GAL3ST2Q9H3Q3 398 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 UNKLQ9H9P5 680 aaKnown RBP12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 VSX1Q9NZR4 365 aaPredicted RBP12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 HYAL3O43820 417 aaPredicted RBP12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 DIO1P49895 249 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 FUT6P51993 359 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 OR52W1Q6IF63 320 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 CDH24Q86UP0 819 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 CD163Q86VB7 1156 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 STX12Q86Y82 276 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 SYS1Q8N2H4 156 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 OR5M9Q8NGP3 310 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 OR1S1Q8NH92 325 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 MED30Q96HR3 178 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 C4orf36Q96KX1 117 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 RASL10BQ96S79 203 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 KCNMB2Q9Y691 235 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 C5orf49A4QMS7 147 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 RRAS2P62070 204 aaPredicted RBP12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 EBPQ15125 230 aaKnown RBP12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 ACKR1Q16570 336 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 ACSM3Q53FZ2 586 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 UBE2NLQ5JXB2 153 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 DEGS2Q6QHC5 323 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 DCXRQ7Z4W1 244 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 GDPD1Q8N9F7 314 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 OR1J1Q8NGS3 322 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 ARHGDIGQ99819 225 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 PLEKHA3Q9HB20 300 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 PRDM6Q9NQX0 595 aa12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 DIMT1Q9UNQ2 313 aaKnown RBP12.15□□□□□ -0.46
PRPF38A-201ENST00000257181 TRAV38-1A0A0B4J264 116 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 CT45A6P0DMU7 189 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 CT45A5P0DMU8 189 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 CT45A7P0DMV0 189 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 CT45A8P0DMV1 189 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 CT45A9P0DMV2 189 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 CT45A2Q5DJT8 189 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 CT45A1Q5HYN5 189 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 FAM199XQ6PEV8 388 aaPredicted RBP12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 ADPRHL1Q8NDY3 354 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 OR10D3Q8NH80 312 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 CT45A3Q8NHU0 189 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 TAMM41Q96BW9 452 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 SLAMF6Q96DU3 332 aa12.15□□□□□ -0.47
PRPF38A-201ENST00000257181 TTC3P53804 2025 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 IGHV1-45A0A0A0MS14 117 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 NOS1APO75052 506 aaPredicted RBP12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 IFNA2P01563 188 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 MPGP29372 298 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 NR4A2P43354 598 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 PRRX1P54821 245 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 IGFN1Q86VF2 1251 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 C17orf78Q8N4C9 275 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 ANKRD53Q8N9V6 530 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 OR6F1Q8NGZ6 308 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 PP6455Q8WZ26 134 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 LIN28AQ9H9Z2 209 aaKnown RBP12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 CMC2Q9NRP2 79 aa12.14□□□□□ -0.47
PRPF38A-201ENST00000257181 SIRT3Q9NTG7 399 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms