RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 NKAIN4Q8IVV8 208 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF511Q8NB15 262 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 SDF2Q99470 211 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 C1QTNF6Q9BXI9 259 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 MOB1AQ9H8S9 216 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ACOXLQ9NUZ1 547 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF705FA8MVS1 300 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF195O14628 629 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 APOA2P02652 100 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF705DP0CH99 300 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF705BP0CI00 300 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-201ENST00000254630 SDHAP31040 664 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 HCCSP53701 268 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 C9orf50Q5SZB4 431 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 BARHL1Q9BZE3 327 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 TBX21Q9UL17 535 aa7.97□□□□□ -1.13
PTCD3-201ENST00000254630 C5orf49A4QMS7 147 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 IDSB3KWA1 339 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 GLAP06280 429 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 RPS2P15880 293 aaKnown RBP7.96□□□□□ -1.13
PTCD3-201ENST00000254630 OMGP23515 440 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 GSK3AP49840 483 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 HYAL1Q12794 435 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 IHHQ14623 411 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 STEAP1BQ6NZ63 245 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 FAM185AQ8N0U4 392 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 CLDN22Q8N7P3 220 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 EXD3Q8N9H8 876 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 BHLHE23Q8NDY6 225 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 TCTEX1D2Q8WW35 142 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 OXGR1Q96P68 337 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 NAA50Q9GZZ1 169 aaKnown RBP7.96□□□□□ -1.13
PTCD3-201ENST00000254630 NDRG4Q9ULP0 352 aaKnown RBP7.96□□□□□ -1.13
PTCD3-201ENST00000254630 COPS3Q9UNS2 423 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 SH2D1BO14796 132 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 OR2J2O76002 312 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 ST6GAL1P15907 406 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 CD22P20273 847 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 HNRNPFP52597 415 aaKnown RBP7.96□□□□□ -1.13
PTCD3-201ENST00000254630 MDGA2Q7Z553 956 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 WFDC8Q8IUA0 241 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 OR56B4Q8NH76 319 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 SLAMF6Q96DU3 332 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 SSUH2Q9Y2M2 353 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 STRCP1A6NGW2 1772 aa7.96□□□□□ -1.13
PTCD3-201ENST00000254630 A0A087WZY1 265 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 BTBD17A6NE02 478 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 SNAPINO95295 136 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 SNRNP70P08621 437 aaKnown RBP7.96□□□□□ -1.14
PTCD3-201ENST00000254630 CSF3P09919 207 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 GPR3P46089 330 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 FCRL6Q6DN72 434 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 SIAH3Q8IW03 269 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 OR6M1Q8NGM8 313 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 LRRC61Q9BV99 259 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.96□□□□□ -1.14
PTCD3-201ENST00000254630 TRDV1A0A1B0GX56 115 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 A6NHS1 94 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 CNIH1O95406 144 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 RAP2BP61225 183 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 RAC1P63000 192 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 SSX2Q16385 188 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 PHLDA2Q53GA4 152 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 NANOGP1Q8N7R0 232 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 FCRL1Q96LA6 429 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 OR5M11Q96RB7 305 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 PSD2Q9BQI7 771 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 UBQLN3Q9H347 655 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 METTL17Q9H7H0 456 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-201ENST00000254630 CGGBP1Q9UFW8 167 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-201ENST00000254630 PURGQ9UJV8 347 aaKnown RBP7.96□□□□□ -1.14
PTCD3-201ENST00000254630 FBXO4Q9UKT5 387 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 A0A087WV62 115 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 AGAP14A8MT82 685 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 ZNF732B4DXR9 585 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 ETV1P50549 477 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 MRPS34P82930 218 aaKnown RBP7.96□□□□□ -1.14
PTCD3-201ENST00000254630 MYBPHQ13203 477 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 KCNJ8Q15842 424 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 DLEU7Q6UYE1 221 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 OR10X1Q8NGY0 326 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 OR51E1Q8TCB6 317 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 RNF170Q96K19 258 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 LINC00615Q96LM1 132 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-201ENST00000254630 EMC6Q9BV81 110 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 CLEC2DQ9UHP7 191 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 CHRNB1P11230 501 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 ARL16Q0P5N6 197 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 LHX8Q68G74 356 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 OR1M1Q8NGA1 313 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 NANPQ8TBE9 248 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 ST7LQ8TDW4 575 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 RANGRFQ9HD47 186 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-201ENST00000254630 MTCH1Q9NZJ7 389 aa7.96□□□□□ -1.14
PTCD3-201ENST00000254630 OR2A25A4D2G3 310 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 FADS1O60427 444 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 SCAF4O95104 1147 aaKnown RBP7.95□□□□□ -1.14
PTCD3-201ENST00000254630 IL2RAP01589 272 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 MYF5P13349 255 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 SNCAP37840 140 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms