RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ZFP82Q8N141 532 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 TCTEX1D2Q8WW35 142 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 C20orf85Q9H1P6 137 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 KIF25Q9UIL4 384 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 TNFSF15O95150 251 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 CLEC3BP05452 202 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 BCKDHBP21953 392 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 CPT2P23786 658 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 RNF4P78317 190 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 SLC10A1Q14973 349 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 OPCMLQ14982 345 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 MENTQ9BUN1 341 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 NT5DC2Q9H857 520 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 OBP2AQ9NY56 170 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 PTTG3PQ9NZH4 202 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 SEMA6DQ8NFY4 1073 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 STACQ99469 402 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 FAAP20Q6NZ36 180 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 C16orf52Q8NHV5 167 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 C3orf49Q96BT1 292 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 IKZF5Q9H5V7 419 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 HEYLQ9NQ87 328 aaPredicted RBP17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 TAS2R5Q9NYW4 299 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 BTAF1O14981 1849 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 A0A1B0GTL3 188 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 C5orf49A4QMS7 147 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 RAP2BP61225 183 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 RPS27AP62979 156 aaKnown RBP17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 UBA52P62987 128 aaKnown RBP17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 IL34Q6ZMJ4 242 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 RHOUQ7L0Q8 258 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 ADGRE4PQ86SQ3 457 aa17.08■□□□□ 0.33
SMARCC1-201ENST00000254480 PHIPQ8WWQ0 1821 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 MGST1P10620 155 aaKnown RBP17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 NID1P14543 1247 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 ACKR1Q16570 336 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 TMEM196Q5HYL7 178 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 GLTPQ9NZD2 209 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 CYB5BO43169 146 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 CNIH1O95406 144 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 PPIAP62937 165 aaKnown RBP17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 CTU2Q2VPK5 515 aaKnown RBP17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 BAHD1Q8TBE0 780 aaPredicted RBP17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 SLC35B4Q969S0 331 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 FCRL1Q96LA6 429 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 C19orf53Q9UNZ5 99 aaPredicted RBP17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 TNFRSF10CO14798 259 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 CA13Q8N1Q1 262 aa17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 HINT3Q9NQE9 182 aaKnown RBP17.08■□□□□ 0.32
SMARCC1-201ENST00000254480 PCSK6P29122 969 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 EMP3P54852 163 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 OR8G1Q15617 311 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 CTSFQ9UBX1 484 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 PPP1R3CQ9UQK1 317 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 OR6C65A6NJZ3 312 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 ZNF891A8MT65 544 aaPredicted RBP17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 SIRPB1O00241 398 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 NAGAP17050 411 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 TMEM81Q6P7N7 255 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 USP51Q70EK9 711 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 CCDC74BQ96LY2 380 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 ZNF816-ZNF321PA0A0X1KG74 233 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 LOC107986453A0A1B0GWG9 222 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 SHISA8B8ZZ34 492 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 UBL3O95164 117 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 ELLP55199 621 aaPredicted RBP17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 WFDC8Q8IUA0 241 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 ZNF321PQ8N8H1 164 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 UBL7Q96S82 380 aaPredicted RBP17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 SLC39A9Q9NUM3 307 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 BRWD1Q9NSI6 2320 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 NKX6-3A6NJ46 265 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 M0R1B8 84 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 ADAM23O75077 832 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 ACTBL2Q562R1 376 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 LOXL2Q9Y4K0 774 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 UGT2A1Q9Y4X1 527 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 MBOAT4Q96T53 435 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 CHST11Q9NPF2 352 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 ATP23Q9Y6H3 246 aa17.07■□□□□ 0.32
SMARCC1-201ENST00000254480 TRABD2BA6NFA1 517 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 WNT11O96014 354 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 KLK4Q9Y5K2 254 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 GPR171O14626 319 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 YKT6O15498 198 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 FOLR1P15328 257 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 CD22P20273 847 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 UBE2MP61081 183 aaKnown RBP17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 SPNS1Q9H2V7 528 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 SLC22A11Q9NSA0 550 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 RBFOX1Q9NWB1 397 aaKnown RBP17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 MAP1BP46821 2468 aaKnown RBP17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 SULT1C2O00338 296 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 PPM1DO15297 605 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 CXCL13O43927 109 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 RUNX2Q13950 521 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 SLC22A25Q6T423 547 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 TMPRSS7Q7RTY8 843 aa17.06■□□□□ 0.32
SMARCC1-201ENST00000254480 WDR5BQ86VZ2 330 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms