RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 NUMA1Q14980 2115 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 FAM166BA8MTA8 275 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 KDM4EB2RXH2 506 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 MCRIP1C9JLW8 97 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 M0QZQ0 153 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 SLC19A1P41440 591 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 ARRB1P49407 418 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 C2orf50Q96LR7 162 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 LINC00052Q96N35 136 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 NECAP2Q9NVZ3 263 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR14J1Q9UGF5 321 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 TMEM127O75204 238 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 CTSLP07711 333 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 CHRM4P08173 479 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 TBPP20226 339 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 MTCP1P56278 107 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 SNRPNP63162 240 aaKnown RBP12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 SERTAD2Q14140 314 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 CLEC12BQ2HXU8 276 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 WBP2NLQ6ICG8 309 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 C11orf87Q6NUJ2 197 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF429Q86V71 674 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 GLCCI1Q86VQ1 547 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 ARFGAP1Q8N6T3 406 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 ST6GAL2Q96JF0 529 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 FAM210BQ96KR6 192 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 CHST2Q9Y4C5 530 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR5K4A6NMS3 321 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 TRAPPC2LH3BP13 241 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 CHEK1O14757 476 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 S100A7P31151 101 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 PTGER4P35408 488 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 ACOT4Q8N9L9 421 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 WDFY2Q96P53 400 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR5V1Q9UGF6 321 aa12.11□□□□□ -0.47
PCDHGA3-201ENST00000253812 ANKRD61A6NGH8 418 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 MAN2B1O00754 1011 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 XCR1P46094 333 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 PMPCAQ10713 525 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 PMS2P11Q13670 270 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZFP62Q8NB50 900 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 BVESQ8NE79 360 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 TANKQ92844 425 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 TNFRSF13CQ96RJ3 184 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 TRAV34A0A0B4J273 112 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 LOC102725191A0A1B0GVB3 256 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 XKRY2A2RUG3 117 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 LMAN2Q12907 356 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 SLC35D3Q5M8T2 416 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 C5orf46Q6UWT4 87 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 GLDNQ6ZMI3 551 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF100Q8IYN0 542 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 NHLRC2Q8NBF2 726 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 IL23AQ9NPF7 189 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 TJP1Q07157 1748 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 EIF4EP06730 217 aaKnown RBP12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 ARSAP15289 507 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 MMP11P24347 488 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 TEAD1P28347 426 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 MMP15P51511 669 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 PPP1CBP62140 327 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR5I1Q13606 314 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 PHLDA2Q53GA4 152 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 PLAC9Q5JTB6 97 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 DLEU7Q6UYE1 221 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 WDR88Q6ZMY6 472 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 PLPP7Q8NBV4 271 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 LYSMD1Q96S90 227 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 IL17BQ9UHF5 180 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZAR1LA6NP61 321 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 ANKRD30BLA7E2S9 258 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 SLC31A2O15432 143 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 OR10J4P0C629 311 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 FCGR2AP12318 317 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 KCNJ3P48549 501 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 FABP5Q01469 135 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 IHHQ14623 411 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 NCMAPQ5T1S8 102 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 LYG2Q86SG7 212 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 VRK3Q8IV63 474 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 METTL27Q8N6F8 245 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 EMG1Q92979 244 aaKnown RBP12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 CXorf58Q96LI9 332 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 MARVELD1Q9BSK0 173 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 ACTR3CQ9C0K3 210 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 SLC35B3Q9H1N7 401 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 PRSS16Q9NQE7 514 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 SUSD2Q9UGT4 822 aa12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 ARID1BQ8NFD5 2236 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA3-201ENST00000253812 MYH15Q9Y2K3 1946 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 A0A087WV62 115 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZIC2O95409 532 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF133P52736 654 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNF154Q13106 437 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 CMTM4Q8IZR5 234 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 DMBX1Q8NFW5 382 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 ZNRF4Q8WWF5 429 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 SHDQ96IW2 340 aa12.09□□□□□ -0.47
PCDHGA3-201ENST00000253812 DLL4Q9NR61 685 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms