RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 OR52N5Q8NH56 324 aa17.52■□□□□ 0.4
CDC42EP1-201ENST00000249014 ASB10Q8WXI3 467 aa17.52■□□□□ 0.4
CDC42EP1-201ENST00000249014 OR6C1Q96RD1 312 aa17.52■□□□□ 0.4
CDC42EP1-201ENST00000249014 ZNF436Q9C0F3 470 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP1-201ENST00000249014 PTTG3PQ9NZH4 202 aa17.52■□□□□ 0.4
CDC42EP1-201ENST00000249014 FBXL3Q9UKT7 428 aa17.52■□□□□ 0.4
CDC42EP1-201ENST00000249014 CACNA1EQ15878 2313 aa17.52■□□□□ 0.4
CDC42EP1-201ENST00000249014 IGKV1D-43A0A0B4J1Z2 117 aa17.52■□□□□ 0.39
CDC42EP1-201ENST00000249014 CRABP1P29762 137 aa17.52■□□□□ 0.39
CDC42EP1-201ENST00000249014 C2orf76Q3KRA6 126 aa17.52■□□□□ 0.39
CDC42EP1-201ENST00000249014 TMEM225Q6GV28 225 aa17.52■□□□□ 0.39
CDC42EP1-201ENST00000249014 ST8SIA1Q92185 356 aa17.52■□□□□ 0.39
CDC42EP1-201ENST00000249014 THRSPQ92748 146 aa17.52■□□□□ 0.39
CDC42EP1-201ENST00000249014 SHDQ96IW2 340 aa17.52■□□□□ 0.39
CDC42EP1-201ENST00000249014 METTL17Q9H7H0 456 aaPredicted RBP17.52■□□□□ 0.39
CDC42EP1-201ENST00000249014 NPDC1Q9NQX5 325 aaPredicted RBP17.52■□□□□ 0.39
CDC42EP1-201ENST00000249014 ADAMTS9Q9P2N4 1935 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 CIB4A0PJX0 185 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 SHISA8B8ZZ34 492 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 H7C417 338 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 SLC17A2O00624 439 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 DOK2O60496 412 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 ICMTO60725 284 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 SRSF10O75494 262 aaKnown RBP17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 ANXA7P20073 488 aaKnown RBP17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 PTGS2P35354 604 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 PER3P56645 1201 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 LGALSLQ3ZCW2 172 aaPredicted RBP17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 METTL11BQ5VVY1 283 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 FAM166AQ6J272 317 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 GUSBP11Q6P575 273 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 GLDNQ6ZMI3 551 aaPredicted RBP17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 NLRC3Q7RTR2 1065 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZNF248Q8NDW4 579 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 SLC26A10Q8NG04 563 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 OR8H1Q8NGG4 311 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 FAM3DQ96BQ1 224 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 HEXA-AS1Q9H8Q6 139 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 MTFP1Q9UDX5 166 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 SCP2D1Q9UJQ7 156 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 DHDHQ9UQ10 334 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 WDR87Q6ZQQ6 2873 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 CFAP54Q96N23 3096 aa17.51■□□□□ 0.39
CDC42EP1-201ENST00000249014 CPED1A4D0V7 1026 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 ALOX12BO75342 701 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 TPPPO94811 219 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 DCNP07585 359 aaKnown RBP17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 DNASE1P24855 282 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 MAP2K6P52564 334 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 GUCA2AQ02747 115 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 FOXF1Q12946 379 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 RAB11BQ15907 218 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 PCGF3Q3KNV8 242 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZBTB37Q5TC79 503 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 THOC7Q6I9Y2 204 aaKnown RBP17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 MFSD8Q8NHS3 518 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 NUBPLQ8TB37 319 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 WDR77Q9BQA1 342 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 MED29Q9NX70 200 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 TRBV11-1A0A0K0K1C0 115 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 TOX3O15405 576 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 RBBP9O75884 186 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 NDUFB6O95139 128 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 ARRB1P49407 418 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZP4Q12836 540 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 PAPD4Q6PIY7 484 aaKnown RBP17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 H1FNTQ75WM6 255 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 BPHLQ86WA6 291 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 LINC00346Q8IVM7 164 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 ZNF454Q8N9F8 522 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 OR1J4Q8NGS1 313 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 OR2T35Q8NGX2 323 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 OR6S1Q8NH40 331 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 UTP23Q9BRU9 249 aaKnown RBP17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 TAS2R4Q9NYW5 299 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 ELF5Q9UKW6 265 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 EMC9Q9Y3B6 208 aa17.5■□□□□ 0.39
CDC42EP1-201ENST00000249014 A0A1W2PQM1 296 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 NPIPA5E9PKD4 350 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 TOXO94900 526 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 TPOP07202 933 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 APOBEC1P41238 236 aaKnown RBP17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 CXCL12P48061 93 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 POU3F1Q03052 451 aaPredicted RBP17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 PTCRAQ6ISU1 281 aaPredicted RBP17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 TEX261Q6UWH6 196 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 DCXRQ7Z4W1 244 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 OR4D10Q8NGI6 311 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 SLC25A28Q96A46 364 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 KCNK17Q96T54 332 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 IRF2BPLQ9H1B7 796 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 NPIPA1Q9UND3 350 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 U3KQ87 197 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 TRAV18A0A075B6X5 111 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 LOC100289279A0A1B0GTE1 492 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 TMEM272A0A1B0GTI8 110 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 A6NIZ1 184 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 EFNA2O43921 213 aa17.49■□□□□ 0.39
CDC42EP1-201ENST00000249014 SCRG1O75711 98 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms