RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TNS1Q9HBL0 1735 aaKnown RBP11.81□□□□□ -0.52
MSH2-201ENST00000233146 NXPH2O95156 264 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 GCGP01275 180 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 CSRP1P21291 193 aaKnown RBP11.81□□□□□ -0.52
MSH2-201ENST00000233146 SLC2A5P22732 501 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 PRSS3P35030 304 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 MC3RP41968 323 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 CARD18P57730 90 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 RIPPLY2Q5TAB7 128 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 ZNF343Q6P1L6 599 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 TMEM229BQ8NBD8 167 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 OR1N1Q8NGS0 311 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 OR6K2Q8NGY2 324 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 OR4K15Q8NH41 348 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 GPX8Q8TED1 209 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 PHB2Q99623 299 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 C1QTNF2Q9BXJ5 285 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 TTTY10Q9BZA0 68 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 GPR62Q9BZJ7 368 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 NMES1Q9C002 83 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 SLC2A4RGQ9NR83 387 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 CD84Q9UIB8 345 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 LNP1A1A4G5 178 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 B4E171 279 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 BHLHE40O14503 412 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 GPRIN2O60269 458 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 TSPAN15O95858 294 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 LYL1P12980 280 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 PPP1R1AQ13522 171 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 SLC16A14Q7RTX9 510 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 SYS1Q8N2H4 156 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 OR5P2Q8WZ92 322 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 CLP1Q92989 425 aaKnown RBP11.8□□□□□ -0.52
MSH2-201ENST00000233146 SHDQ96IW2 340 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 GNRHR2Q96P88 292 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 SLC35B3Q9H1N7 401 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 PLEKHA2Q9HB19 425 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 IL36AQ9UHA7 158 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 CRLS1Q9UJA2 301 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 FARSAQ9Y285 508 aaKnown RBP11.8□□□□□ -0.52
MSH2-201ENST00000233146 PPIL1Q9Y3C6 166 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 CPSF4LA6NMK7 179 aaKnown RBP11.8□□□□□ -0.52
MSH2-201ENST00000233146 ZNF727A8MUV8 499 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 ZNF705GA8MUZ8 300 aaPredicted RBP11.8□□□□□ -0.52
MSH2-201ENST00000233146 SLC16A5O15375 505 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 TCF21O43680 179 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 CTAG2O75638 210 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 AMY2AP04746 511 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 NR2F1P10589 423 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 LIPCP11150 499 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 EDNRAP25101 427 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 HMGB2P26583 209 aaKnown RBP11.8□□□□□ -0.52
MSH2-201ENST00000233146 RASGEF1BQ0VAM2 473 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 HERPUD1Q15011 391 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 NCR3LG1Q68D85 454 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 ULK3Q6PHR2 472 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 STAC2Q6ZMT1 411 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 GJD3Q8N144 294 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 SLC2A12Q8TD20 617 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 MOAP1Q96BY2 351 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 KCNJ16Q9NPI9 418 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 HAO2Q9NYQ3 351 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 VSIG4Q9Y279 399 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 YBX2Q9Y2T7 364 aaKnown RBP11.8□□□□□ -0.52
MSH2-201ENST00000233146 DOCK6Q96HP0 2047 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 TRDCB7Z8K6 153 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 M0QYG6 137 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 SAP18O00422 153 aaKnown RBP11.8□□□□□ -0.52
MSH2-201ENST00000233146 PTGESO14684 152 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 TGOLN2O43493 480 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 AMBPP02760 352 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 ADRA2CP18825 462 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 RABIFP47224 123 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 FXYD6P3P58550 94 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 ERVFRD-1P60508 538 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 ACTBP60709 375 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 ACTG1P63261 375 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 AMZ1Q400G9 498 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 RPL7L1Q6DKI1 246 aaKnown RBP11.8□□□□□ -0.52
MSH2-201ENST00000233146 SEMA6DQ8NFY4 1073 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 OR14K1Q8NGZ2 314 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 G6PC3Q9BUM1 346 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 KATNBL1Q9H079 304 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 LPAR2Q9HBW0 351 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 PITPNC1Q9UKF7 332 aa11.8□□□□□ -0.52
MSH2-201ENST00000233146 PRG3Q9Y2Y8 225 aaPredicted RBP11.8□□□□□ -0.52
MSH2-201ENST00000233146 TRAV18A0A075B6X5 111 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 CIDEAO60543 219 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 RAMP1O60894 148 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 APODP05090 189 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 MPC1LP0DKB6 136 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 TBPP20226 339 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 SCAND1P57086 179 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 TMEM268Q5VZI3 342 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 MBOAT2Q6ZWT7 520 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 FIBINQ8TAL6 211 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 SFXN5Q8TD22 340 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 EIF5A2Q9GZV4 153 aaKnown RBP11.79□□□□□ -0.52
MSH2-201ENST00000233146 CST11Q9H112 138 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 OR52D1Q9H346 318 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms