RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ORAI1Q96D31 301 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 CDCA4Q9BXL8 241 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 SEMA4CQ9C0C4 833 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 TMEM30AQ9NV96 361 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 TMEM184BQ9Y519 407 aaPredicted RBP12.25□□□□□ -0.45
NEK4-201ENST00000233027 ETHE1O95571 254 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 PTBP1P26599 531 aaKnown RBP eCLIP12.25□□□□□ -0.45
NEK4-201ENST00000233027 EPHA2P29317 976 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 RPS27P42677 84 aaKnown RBP12.25□□□□□ -0.45
NEK4-201ENST00000233027 ZNF266Q14584 549 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 H3F3CQ6NXT2 135 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 FAM26EQ8N5C1 309 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 ANKLE1Q8NAG6 615 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 SLC25A21Q9BQT8 299 aaPredicted RBP12.25□□□□□ -0.45
NEK4-201ENST00000233027 PIGQQ9BRB3 760 aa12.25□□□□□ -0.45
NEK4-201ENST00000233027 LOC107986453A0A1B0GWG9 222 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 LAP3P28838 519 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 SLC6A12P48065 614 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 TM4SF4P48230 202 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 GPR85P60893 370 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 ACVR1Q04771 509 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 SLC10A1Q14973 349 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 TOR2AQ5JU69 321 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 LPCAT3Q6P1A2 487 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 SYT13Q7L8C5 426 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 RBMXL3Q8N7X1 1067 aaKnown RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 OR10Z1Q8NGY1 313 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 SFT2D1Q8WV19 159 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 FGF21Q9NSA1 209 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 ZNF346Q9UL40 294 aaKnown RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 DDX60LQ5H9U9 1706 aaKnown RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 LOXHD1Q8IVV2 1947 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 M0R082 166 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 CER1O95813 267 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 GRPP07492 148 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 GIPP09681 153 aaPredicted RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 SPI1P17947 270 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 ALOX5APP20292 161 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 HABP2Q14520 560 aaPredicted RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 TMEM71Q6P5X7 295 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 SH2D5Q6ZV89 423 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 H1FNTQ75WM6 255 aaPredicted RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 CMTM4Q8IZR5 234 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 OR51A4Q8NGJ6 313 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 OR1E3Q8WZA6 343 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 CDCP1Q9H5V8 836 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 AUNIPQ9H7T9 357 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 ERVMER34-1Q9H9K5 563 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 PLSCR3Q9NRY6 295 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 PRAMEF25A6NGN4 478 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 DCAF12Q5T6F0 453 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 FAM122BQ7Z309 247 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 BAGE3Q86Y29 109 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 BAGE2Q86Y30 109 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 PATE1Q8WXA2 126 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 UTP23Q9BRU9 249 aaKnown RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 MYOTQ9UBF9 498 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 TMEM200CA6NKL6 621 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 LGALS8O00214 317 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 TAGLNQ01995 201 aaKnown RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 HSF5Q4G112 596 aaPredicted RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 GOT1L1Q8NHS2 421 aaPredicted RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 DUS3LQ96G46 650 aaKnown RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 SPACA5Q96QH8 159 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 TPPP3Q9BW30 176 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 LYRM4Q9HD34 91 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 DAPP1Q9UN19 280 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 NUMA1Q14980 2115 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 CD1CP29017 333 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 EDDM3AQ14507 147 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 DHRS4L2Q6PKH6 230 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 OR51A2Q8NGJ7 313 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 PHYHIPQ92561 330 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 EMG1Q92979 244 aaKnown RBP12.24□□□□□ -0.45
NEK4-201ENST00000233027 HIPK2Q9H2X6 1198 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 FGF22Q9HCT0 170 aa12.24□□□□□ -0.45
NEK4-201ENST00000233027 ZNF814B7Z6K7 855 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 FGF17O60258 216 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 FCMRO60667 390 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 NID1P14543 1247 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 GABRB1P18505 474 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 ZNF133P52736 654 aaPredicted RBP12.23□□□□□ -0.45
NEK4-201ENST00000233027 SSTP61278 116 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 GRB2P62993 217 aaKnown RBP12.23□□□□□ -0.45
NEK4-201ENST00000233027 SRPXP78539 464 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 BAK1Q16611 211 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 OR5AS1Q8N127 324 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 OR2L13Q8N349 312 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 RELL2Q8NC24 303 aaPredicted RBP12.23□□□□□ -0.45
NEK4-201ENST00000233027 OR51H1Q8NH63 302 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 NPFFR2Q9Y5X5 522 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 NPBWR1P48145 328 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 EDDM3BP56851 147 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 LINC01465Q8N7H1 131 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 LIPHQ8WWY8 451 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 USB1Q9BQ65 265 aaKnown RBP12.23□□□□□ -0.45
NEK4-201ENST00000233027 CMC2Q9NRP2 79 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 MMACHCQ9Y4U1 282 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 CROCCQ5TZA2 2017 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 EMDP50402 254 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms