RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 CENPAP49450 140 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 CDK5Q00535 292 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 NAAAQ02083 359 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 CRMP1Q14194 572 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 PGGHGQ32M88 737 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 ZNF672Q499Z4 452 aaPredicted RBP12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 SVOPLQ8N434 492 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 RADILQ96JH8 1075 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 SNX18Q96RF0 628 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 ZNF416Q9BWM5 594 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 GABARAPL1Q9H0R8 117 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 PAPOLBQ9NRJ5 636 aaKnown RBP12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 TMEFF2Q9UIK5 374 aaPredicted RBP12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 BAIAP2Q9UQB8 552 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 PLEKHA6Q9Y2H5 1048 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 TEX15Q9BXT5 2789 aa12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 RAI1Q7Z5J4 1906 aaPredicted RBP12.5□□□□□ -0.41
SUPT4H1-201ENST00000225504 CSMD2Q7Z408 3487 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 HS3ST1O14792 307 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 UBL3O95164 117 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 ZNF32P17041 273 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 MSR1P21757 451 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 CRABP1P29762 137 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 GRK5P34947 590 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 POLR2IP36954 125 aaKnown RBP12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 CRISP1P54107 249 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 HGFACQ04756 655 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 MEP1BQ16820 701 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 C3orf36Q3SXR2 165 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 PABPC1L2AQ5JQF8 200 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 KDM4DQ6B0I6 523 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 ZBTB46Q86UZ6 589 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 GLB1L2Q8IW92 636 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 C10orf67Q8IYJ2 551 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 CPEB3Q8NE35 698 aaKnown RBP12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 OR51L1Q8NGJ5 315 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 OR9Q1Q8NGQ5 310 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 AKR7LQ8NHP1 331 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 C11orf40Q8WZ69 217 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 RBM4Q9BWF3 364 aaKnown RBP12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 HCAR1Q9BXC0 346 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 MED20Q9H944 212 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 CISD1Q9NZ45 108 aaKnown RBP12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 KIF17Q9P2E2 1029 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 ST6GALNAC2Q9UJ37 374 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 ATP23Q9Y6H3 246 aa12.49□□□□□ -0.41
SUPT4H1-201ENST00000225504 FAM183AA6NL82 134 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 TFP02787 698 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 SERPINA5P05154 406 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 GYPBP06028 91 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 CST2P09228 141 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 CLUP10909 449 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 CCL2P13500 99 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 PAX7P23759 505 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 GUCA1AP43080 201 aaPredicted RBP12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 PSG4Q00888 419 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 SLC36A2Q495M3 483 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 SLC27A4Q6P1M0 643 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 LYPD4Q6UWN0 246 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 CDH24Q86UP0 819 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 PAQR4Q8N4S7 273 aaPredicted RBP12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 PTP4A1Q93096 173 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 CIB1Q99828 191 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 OSBPL10Q9BXB5 764 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 NMNAT2Q9BZQ4 307 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 CMC2Q9NRP2 79 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 KRT84Q9NSB2 600 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 KLHL21Q9UJP4 597 aa12.48□□□□□ -0.41
SUPT4H1-201ENST00000225504 IGHV2OR16-5A0A0B4J2B6 119 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 ATE1O95260 518 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 RAB36O95755 333 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 BAG2O95816 211 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 CRYAAP02489 173 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 GAAP10253 952 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 ZNF35P13682 527 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 CD53P19397 219 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 APEX1P27695 318 aaKnown RBP12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 CDH11P55287 796 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 PPP2R2BQ00005 443 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 PTGES3Q15185 160 aaKnown RBP12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 KCNMB1Q16558 191 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 TMEM53Q6P2H8 277 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 PAMR1Q6UXH9 720 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 PARP8Q8N3A8 854 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 ZNF611Q8N823 705 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 SLC26A10Q8NG04 563 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 OR2H1Q9GZK4 316 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 WNT5BQ9H1J7 359 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 KCNN2Q9H2S1 579 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 CCNB1IP1Q9NPC3 277 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 FKBP7Q9Y680 259 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 NAV2Q8IVL1 2488 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 DSCAMO60469 2012 aa12.47□□□□□ -0.41
SUPT4H1-201ENST00000225504 LOC100509620A0A075B734 347 aa12.46□□□□□ -0.41
SUPT4H1-201ENST00000225504 RIIAD1A6NNX1 92 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms